Factsheet for Solyc04g081290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 3
plastid 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	99.56	99.56
VIT_18s0001g14030.t01	Wine grape	mitochondrion	84.89	88.43
KRH51716	Soybean	cytosol	82.67	84.16
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	57.78	83.87
KRH05931	Soybean	cytosol	80.0	83.72
KRH61054	Soybean	cytosol	82.22	82.22
GSMUA_Achr11P...	Banana	cytosol, plastid	80.0	82.19
KRH17410	Soybean	cytosol	77.33	81.69
GSMUA_Achr8P19190_001	Banana	cytosol	78.67	79.02
Solyc09g007830.2.1	Tomato	cytosol	76.44	78.9
Solyc10g084150.1.1	Tomato	cytosol	75.56	77.27
Solyc06g075090.2.1	Tomato	cytosol	64.44	75.92
Solyc01g007270.1.1	Tomato	cytosol	23.56	75.71
Solyc10g082020.1.1	Tomato	cytosol	71.11	73.73
GSMUA_Achr2P00980_001	Banana	cytosol	79.56	72.47
AT2G35990.1	Thale cress	cytosol	66.22	69.95
CDY40411	Canola	cytosol	65.78	69.48
Bra017270.1-P	Field mustard	cytosol	65.33	69.01
CDY32063	Canola	cytosol	64.44	68.08
CDX79649	Canola	cytosol	55.56	67.57
Solyc11g069570.1.1	Tomato	cytosol	70.22	67.52
Solyc08g062820.2.1	Tomato	cytosol	62.67	66.2
Os03t0857900-02	Rice	nucleus	69.78	63.82
Solyc01g005680.2.1	Tomato	mitochondrion	57.78	63.73
HORVU5Hr1G124750.1	Barley	cytosol	68.44	62.1
TraesCS4A01G318100.1	Wheat	plastid	68.0	61.69
TraesCS5D01G568500.1	Wheat	cytosol	67.11	60.89
TraesCS4A01G317900.1	Wheat	plastid	66.22	60.82
TraesCS5D01G568400.1	Wheat	plastid	63.11	60.43
TraesCS5B01G561300.1	Wheat	plastid	67.11	60.4
TraesCS5B01G561400.1	Wheat	plastid	65.78	59.92
EER93059	Sorghum	cytosol	40.0	49.45

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	UniProt:K4BVK8	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF19	SUPFAM:SSF102405	EnsemblPlantsGene:Solyc04g081290.2	EnsemblPlants:Solyc04g081290.2.1	TIGRFAMs:TIGR00730
UniParc:UPI0002765E9D	SEG:seg	:	:	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:K4BVK8]

Coordinates

chr4:+:65331682..65334990

Molecular Weight (calculated)

24613.8 Da

IEP (calculated)

7.662

GRAVY (calculated)

-0.153

Length

225 amino acids

Sequence
(BLAST)

001: MENNHQTQIQ TTKTSRFKRI CVFCGSSPGK KPSYQLAAIQ LGNQLVERNI DLVYGGGSVG LMGLVSQSVF NGGRHVLGVI PKTLMPREIT GESVGEVRAV
101: SGMHQRKAEM ARQADAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VDGYYNSLLS FIDKAVDEGF VTPSARHIII SAPTAQELMS KLEDYVPKHN
201: GVAPKLSWEM EQQLGYTTTK LEIAR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.