Factsheet for Bra017270.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40411	Canola	cytosol	99.06	99.06
CDY32063	Canola	cytosol	97.65	97.65
AT2G35990.1	Thale cress	cytosol	95.31	95.31
Bra009182.1-P	Field mustard	cytosol	73.71	73.02
VIT_18s0001g14030.t01	Wine grape	mitochondrion	69.95	68.98
Bra017202.1-P	Field mustard	cytosol	67.14	68.1
Bra023107.1-P	Field mustard	cytosol	65.73	67.96
KRH05931	Soybean	cytosol	68.54	67.91
GSMUA_Achr11P...	Banana	cytosol, plastid	68.54	66.67
KRH17410	Soybean	cytosol	66.2	66.2
Solyc04g081290.2.1	Tomato	cytosol	69.01	65.33
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	69.01	65.33
Bra003135.1-P	Field mustard	cytosol	51.17	65.27
Bra034399.1-P	Field mustard	cytosol	65.26	65.26
KRH51716	Soybean	cytosol	67.14	64.71
Bra011962.1-P	Field mustard	cytosol	64.32	64.32
GSMUA_Achr8P19190_001	Banana	cytosol	67.14	63.84
KRH61054	Soybean	cytosol	67.14	63.56
Bra039788.1-P	Field mustard	cytosol	49.77	63.47
Bra007000.1-P	Field mustard	cytosol	49.77	63.1
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	45.54	62.58
TraesCS5D01G568400.1	Wheat	plastid	64.32	58.3
Bra023351.1-P	Field mustard	cytosol	59.15	58.06
Bra020803.1-P	Field mustard	cytosol	61.97	57.89
GSMUA_Achr2P00980_001	Banana	cytosol	66.67	57.49
Os03t0857900-02	Rice	nucleus	66.2	57.32
Bra011592.1-P	Field mustard	cytosol	62.91	57.27
TraesCS4A01G317900.1	Wheat	plastid	65.73	57.14
Bra008924.1-P	Field mustard	cytosol	57.75	56.94
TraesCS5D01G568500.1	Wheat	cytosol	66.2	56.85
HORVU5Hr1G124750.1	Barley	cytosol	65.73	56.45
TraesCS4A01G318100.1	Wheat	plastid	65.73	56.45
TraesCS5B01G561300.1	Wheat	plastid	66.2	56.4
TraesCS5B01G561400.1	Wheat	plastid	65.26	56.28
Bra036562.1-P	Field mustard	cytosol	48.36	53.65
EER93059	Sorghum	cytosol	43.66	51.1
Bra028736.1-P	Field mustard	nucleus	50.23	41.63
Bra028735.1-P	Field mustard	cytosol	16.9	28.57

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EnsemblPlantsGene:Bra017270	EnsemblPlants:Bra017270.1	EnsemblPlants:Bra017270.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005737
GO:GO:0005829	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	UniProt:M4DL89	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF24	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000254404C	:	:

Description

Putative lysine decarboxylase family protein [Source:Projected from Arabidopsis thaliana (AT2G35990) TAIR;Acc:AT2G35990]

Coordinates

chrA04:+:15645407..15647762

Molecular Weight (calculated)

23184.8 Da

IEP (calculated)

5.567

GRAVY (calculated)

-0.041

Length

213 amino acids

Sequence
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVKRK IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFVA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPTASQLL QLLEEYVPKH DDFVSKMVWD
201: DITDAPTSEG DSC

Best Arabidopsis Sequence Match ( AT2G35990.1 )
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF

Arabidopsis Description

LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.