Factsheet for Bra003135.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra007000.1-P	Field mustard	cytosol	97.01	96.43
Bra039788.1-P	Field mustard	cytosol	96.41	96.41
TraesCS4D01G250300.1	Wheat	mitochondrion	31.74	77.94
CDY52759	Canola	cytosol	100.0	77.67
TraesCS4A01G054500.1	Wheat	mitochondrion	31.14	76.47
AT3G53450.1	Thale cress	cytosol	97.01	75.35
Bra017202.1-P	Field mustard	cytosol	89.82	71.43
Bra023107.1-P	Field mustard	cytosol	86.23	69.9
Solyc09g007830.2.1	Tomato	cytosol	86.23	66.06
PGSC0003DMT400055525	Potato	cytosol	86.23	66.06
PGSC0003DMT400027157	Potato	cytosol	86.23	65.45
GSMUA_Achr6P36490_001	Banana	cytosol	84.43	64.98
KRG95991	Soybean	cytosol	85.03	64.84
Solyc10g084150.1.1	Tomato	cytosol	85.03	64.55
KRH19875	Soybean	cytosol	84.43	64.38
KRH67693	Soybean	cytosol	83.83	63.93
VIT_08s0040g01780.t01	Wine grape	cytosol	83.23	63.76
GSMUA_Achr1P09040_001	Banana	cytosol	83.23	63.76
TraesCS1B01G173200.1	Wheat	mitochondrion	78.44	62.98
TraesCS1A01G156100.1	Wheat	mitochondrion	78.44	62.98
TraesCS1D01G154700.1	Wheat	mitochondrion	78.44	62.98
Bra034399.1-P	Field mustard	cytosol	79.64	62.44
EER94070	Sorghum	mitochondrion	77.25	62.32
Zm00001d014016_P001	Maize	mitochondrion, nucleus	77.25	62.32
Bra011962.1-P	Field mustard	cytosol	78.44	61.5
TraesCS4B01G250400.1	Wheat	mitochondrion	71.86	58.54
TraesCS4D01G310800.1	Wheat	mitochondrion	71.86	58.54
TraesCS4A01G413200.1	Wheat	mitochondrion	71.86	58.25
Bra009182.1-P	Field mustard	cytosol	74.85	58.14
TraesCS4B01G313800.1	Wheat	mitochondrion	70.66	57.56
EES05457	Sorghum	cytosol	76.65	52.46
Zm00001d003013_P001	Maize	cytosol	77.84	52.21
TraesCS2A01G380600.1	Wheat	cytosol	76.65	52.03
Zm00001d029127_P001	Maize	mitochondrion	70.06	51.54
TraesCS2D01G376900.1	Wheat	cytosol	75.45	51.22
Bra017270.1-P	Field mustard	cytosol	65.27	51.17
Zm00001d025868_P002	Maize	cytosol	77.25	50.99
EES11120	Sorghum	cytosol	78.44	50.58
HORVU2Hr1G089620.5	Barley	cytosol	78.44	49.81
TraesCS1D01G003500.1	Wheat	cytosol	71.26	49.79
Bra011592.1-P	Field mustard	cytosol	67.66	48.29
Bra020803.1-P	Field mustard	cytosol	65.27	47.81
Bra008924.1-P	Field mustard	cytosol	61.68	47.69
EER94862	Sorghum	mitochondrion, plastid	62.28	47.49
Bra023351.1-P	Field mustard	cytosol	60.48	46.54
TraesCS2B01G397600.2	Wheat	cytosol	76.65	45.71
Bra036562.1-P	Field mustard	cytosol	47.31	41.15
Bra028735.1-P	Field mustard	cytosol	23.95	31.75
TraesCS4D01G250200.1	Wheat	mitochondrion	20.96	30.97
Bra028736.1-P	Field mustard	nucleus	44.31	28.79
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	46.11	25.5

Protein Annotations

EnsemblPlants:Bra003135.1	EnsemblPlants:Bra003135.1-P	EnsemblPlantsGene:Bra003135	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	PFAM:PF03641	SUPFAM:SSF102405
TIGRFAMs:TIGR00730	UniParc:UPI000254135A	UniProt:M4CG03	MapMan:11.4.1.2	:	:

Description

AT3G53450 (E=3e-076) | unknown protein

Coordinates

chrA07:-:11521923..11524276

Molecular Weight (calculated)

18252.8 Da

IEP (calculated)

5.582

GRAVY (calculated)

-0.235

Length

167 amino acids

Sequence
(BLAST)

001: MEVNTETMQK SKFGRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMARHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PEYSPCHERV ASKLCWEIER IGYSSED

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.