Factsheet for TraesCS4B01G250400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G250300.1	Wheat	mitochondrion	33.17	100.0
TraesCS4A01G054500.1	Wheat	mitochondrion	32.2	97.06
TraesCS4B01G313800.1	Wheat	mitochondrion	93.17	93.17
TraesCS4D01G250200.1	Wheat	mitochondrion	46.34	84.07
Os03t0109300-01	Rice	mitochondrion	84.39	81.99
TraesCS1B01G173200.1	Wheat	mitochondrion	80.98	79.81
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	76.1	73.58
Bra017202.1-P	Field mustard	cytosol	75.12	73.33
Bra023107.1-P	Field mustard	cytosol	73.66	73.3
AT5G03270.1	Thale cress	cytosol	71.71	73.13
CDY44352	Canola	cytosol	72.2	72.91
Solyc06g075090.2.1	Tomato	cytosol	67.32	72.25
Solyc09g007830.2.1	Tomato	cytosol	76.59	72.02
PGSC0003DMT400055525	Potato	cytosol	76.59	72.02
Bra003135.1-P	Field mustard	cytosol	58.54	71.86
CDY62895	Canola	cytosol	69.27	71.72
Bra034399.1-P	Field mustard	cytosol	74.15	71.36
KRH15578	Soybean	cytosol	26.34	71.05
Bra011962.1-P	Field mustard	cytosol	73.66	70.89
KRH29895	Soybean	cytosol	75.61	70.45
Bra007000.1-P	Field mustard	cytosol	57.56	70.24
VIT_08s0040g01780.t01	Wine grape	cytosol	74.63	70.18
Bra039788.1-P	Field mustard	cytosol	57.07	70.06
GSMUA_Achr6P36490_001	Banana	cytosol	74.15	70.05
KRG95991	Soybean	cytosol	74.63	69.86
KRH22873	Soybean	cytosol	71.22	69.86
PGSC0003DMT400027157	Potato	cytosol	74.63	69.55
Solyc10g084150.1.1	Tomato	cytosol	74.63	69.55
KRH67693	Soybean	cytosol	74.15	69.41
KRH26448	Soybean	cytosol	70.73	69.38
KRH19875	Soybean	cytosol	73.66	68.95
GSMUA_Achr1P09040_001	Banana	cytosol	73.17	68.81
Zm00001d029127_P001	Maize	mitochondrion	74.15	66.96
EER94862	Sorghum	mitochondrion, plastid	71.22	66.67
KRH15614	Soybean	cytosol, extracellular, plastid	22.44	66.67
KRH25030	Soybean	cytosol	75.61	66.52
PGSC0003DMT400020890	Potato	cytosol	71.22	64.04
Solyc11g069570.1.1	Tomato	cytosol	72.68	63.68
KRH07771	Soybean	cytosol	22.44	63.01
TraesCS1B01G379700.1	Wheat	cytosol	60.98	58.14
KRH32483	Soybean	cytosol, golgi, mitochondrion	49.76	56.35
TraesCS3B01G281000.1	Wheat	cytosol	60.98	55.31
TraesCS3B01G241600.1	Wheat	cytosol	64.39	55.23
TraesCS5B01G348600.1	Wheat	cytosol	63.41	53.94
TraesCS5B01G348300.1	Wheat	cytosol	65.37	53.6
TraesCS2B01G397600.2	Wheat	cytosol	72.68	53.21
TraesCS5B01G561300.1	Wheat	plastid	64.88	53.2
TraesCS5B01G561400.1	Wheat	plastid	63.9	53.04
TraesCS5B01G348400.1	Wheat	cytosol	63.41	52.85
TraesCS4B01G035700.1	Wheat	cytosol	58.05	52.65
TraesCS1B01G471300.1	Wheat	cytosol, plastid	67.32	51.49

Protein Annotations

EnsemblPlants:TraesCS4B01G250400.1	EnsemblPlantsGene:TraesCS4B01G250400	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF17	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr4B:-:516951830..516957781

Molecular Weight (calculated)

22515.3 Da

IEP (calculated)

6.150

GRAVY (calculated)

0.008

Length

205 amino acids

Sequence
(BLAST)

001: MSQASRFKRM CVFCGSSQGN KSSYHDAAID LANQLVGGGI DLVYGGGSIG LMGLVSQAVY HGGRHVIGVI PKTLMTPEIV GEMVGEVRPV ADMHQRKAEM
101: ARQSDAFIAL PGGYGTLEEL LEVITWAQLG IHHKPVGLLN VEGYYDSLLT FIDQAVEEGF INPAARRIIV SAPTAHQLME KLEKYVPYYD MVASRLDWKT
201: DRLEF

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.