Factsheet for TraesCS3B01G241600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G213900.1	Wheat	cytosol	99.58	98.76
TraesCS3A01G211100.1	Wheat	cytosol	96.23	98.29
Os01t0588900-01	Rice	cytosol	84.94	83.88
EES03190	Sorghum	cytosol	82.85	78.88
Zm00001d011246_P002	Maize	cytosol	78.24	73.33
VIT_08s0007g02480.t01	Wine grape	cytosol	65.27	72.22
Solyc01g007270.1.1	Tomato	cytosol	20.92	71.43
KRH32819	Soybean	cytosol	63.6	71.03
GSMUA_Achr8P04060_001	Banana	cytosol	66.95	70.8
KRH72214	Soybean	cytosol	63.18	70.56
GSMUA_Achr2P08380_001	Banana	cytosol	66.95	69.87
KRG96247	Soybean	cytosol	61.51	69.01
KRH67989	Soybean	cytosol	61.51	69.01
Solyc10g082020.1.1	Tomato	cytosol	61.51	67.74
CDY04985	Canola	cytosol	60.67	67.44
TraesCS1B01G471300.1	Wheat	cytosol, plastid	75.31	67.16
TraesCS1B01G173200.1	Wheat	mitochondrion	58.16	66.83
HORVU3Hr1G050770.10	Barley	mitochondrion	97.07	66.48
AT5G06300.1	Thale cress	cytosol	60.25	66.36
PGSC0003DMT400042349	Potato	cytosol	59.41	65.14
TraesCS4B01G250400.1	Wheat	mitochondrion	55.23	64.39
TraesCS4B01G313800.1	Wheat	mitochondrion	54.81	63.9
PGSC0003DMT400072345	Potato	cytosol	60.67	63.6
GSMUA_Achr6P35930_001	Banana	cytosol	58.16	62.33
TraesCS5B01G348400.1	Wheat	cytosol	58.16	56.5
TraesCS5B01G348300.1	Wheat	cytosol	59.0	56.4
TraesCS5B01G561400.1	Wheat	plastid	58.16	56.28
TraesCS5B01G348600.1	Wheat	cytosol	55.65	55.19
TraesCS1B01G379700.1	Wheat	cytosol	49.37	54.88
TraesCS5B01G561300.1	Wheat	plastid	57.32	54.8
TraesCS3B01G281000.1	Wheat	cytosol	50.63	53.54
TraesCS2B01G397600.2	Wheat	cytosol	61.51	52.5
TraesCS4B01G035700.1	Wheat	cytosol	48.95	51.77
Bra028735.1-P	Field mustard	cytosol	16.32	30.95

Protein Annotations

EnsemblPlants:TraesCS3B01G241600.1	EnsemblPlantsGene:TraesCS3B01G241600	Gene3D:3.40.50.450	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0048509	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF13	PFAM:PF03641	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2	:

Description

No Description!

Coordinates

chr3B:-:380891833..380895393

Molecular Weight (calculated)

25638.8 Da

IEP (calculated)

5.013

GRAVY (calculated)

0.014

Length

239 amino acids

Sequence
(BLAST)

001: MAVEAMAEKN TGAGVAGGVA PESGDRRSRF RRICVYCGSA KGRKASYQDA AVELGKELVE RGIDLVYGGG SIGLMGLVSH AVHDGGRHVI GVIPKSLMPR
101: EVTGEPVGEV RAVSGMHERK AEMVRSADAF IALPGGYGTL DELLEVLTWA QLGIHKKPIG LLNVDGFYNF FLSFIDMAVS EGFIQEDARH LVISAPTAKE
201: LVLKLEEYVP DYEIGLVWED QGQITHGFAP ELEPGIASS

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.