Factsheet for VIT_08s0007g02480.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG96247	Soybean	cytosol	83.8	84.98
AT5G06300.1	Thale cress	cytosol	85.19	84.79
CDY04985	Canola	cytosol	84.26	84.65
KRH32819	Soybean	cytosol	83.8	84.58
KRH67989	Soybean	cytosol	83.33	84.51
Solyc01g007270.1.1	Tomato	cytosol	27.31	84.29
KRH72214	Soybean	cytosol	83.33	84.11
Solyc10g082020.1.1	Tomato	cytosol	84.26	83.87
Bra009182.1-P	Field mustard	cytosol	83.33	83.72
PGSC0003DMT400042349	Potato	cytosol	81.02	80.28
PGSC0003DMT400072345	Potato	cytosol	82.87	78.51
VIT_18s0001g14030.t01	Wine grape	mitochondrion	78.24	78.24
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	75.46	76.89
VIT_08s0040g01780.t01	Wine grape	cytosol	76.39	75.69
GSMUA_Achr8P04060_001	Banana	cytosol	76.39	73.01
GSMUA_Achr2P08380_001	Banana	cytosol	75.46	71.18
VIT_18s0001g00210.t01	Wine grape	cytosol	71.3	70.32
VIT_03s0038g03420.t01	Wine grape	cytosol	73.15	69.0
TraesCS3A01G211100.1	Wheat	cytosol	71.76	66.24
Os01t0588900-01	Rice	cytosol	73.61	65.7
VIT_04s0008g01040.t01	Wine grape	cytosol	65.74	65.44
TraesCS3B01G241600.1	Wheat	cytosol	72.22	65.27
VIT_06s0004g00590.t01	Wine grape	cytosol, mitochondrion	61.57	64.88
TraesCS3D01G213900.1	Wheat	cytosol	72.22	64.73
EES03190	Sorghum	cytosol	75.0	64.54
VIT_13s0064g00740.t01	Wine grape	cytosol	63.43	63.72
Zm00001d011246_P002	Maize	cytosol	74.07	62.75
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	23.15	62.5
GSMUA_Achr6P35930_001	Banana	cytosol	64.35	62.33
VIT_08s0007g08340.t01	Wine grape	cytosol	62.96	61.26
Os05t0591600-01	Rice	cytosol	73.61	59.77
KXG22670	Sorghum	plastid	70.83	58.85
Zm00001d039174_P001	Maize	plastid	71.76	58.49
TraesCS1B01G471300.1	Wheat	cytosol, plastid	71.76	57.84
TraesCS1D01G444500.1	Wheat	cytosol	71.76	56.78
HORVU1Hr1G094290.7	Barley	plastid	72.22	54.36
Bra028736.1-P	Field mustard	nucleus	57.41	48.25
HORVU3Hr1G050770.10	Barley	mitochondrion	71.76	44.41
Zm00001d044327_P001	Maize	plastid	48.15	40.31

Protein Annotations

EntrezGene:100259707	wikigene:100259707	MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A5B1P2	EMBL:AM443534
ProteinID:CAN67407	ProteinID:CAN67407.1	ProteinID:CBI30371	ProteinID:CBI30371.3	EMBL:FN595991	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EntrezGene:LOC100259707
wikigene:LOC100259707	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF20
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001520105	ArrayExpress:VIT_08s0007g02480	EnsemblPlantsGene:VIT_08s0007g02480	EnsemblPlants:VIT_08s0007g02480.t01
RefSeq:XP_002275414	RefSeq:XP_002275414.1	SEG:seg	:	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A5B1P2]

Coordinates

chr8:+:16603718..16607543

Molecular Weight (calculated)

23713.5 Da

IEP (calculated)

5.391

GRAVY (calculated)

-0.106

Length

216 amino acids

Sequence
(BLAST)

001: MEDTRSRFKR ICVFCGSSSG KKASYQEAAV ELGKELVERR IDLVYGGGSV GLMGLVSQAV HDGGRHVLGV IPRTLMPREI TGETVGEVRA VSHMHERKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHKKPVGLL NVDGYYNSLL SFIDKAVDEG FVSPTARRII VSAPTAKELV RELEEYVPEH DEVTSKLIWE
201: EVEIISYASE KPGVAT

Best Arabidopsis Sequence Match ( AT5G06300.1 )
(BLAST)

001: MEETKSRFKR ICVFCGSSSG KKPSYQEAAI QLGNELVERR IDLVYGGGSV GLMGLVSQAV HHGGRHVLGV IPKTLMPREI TGETIGEVKA VADMHQRKAE
101: MARQADAFIA LPGGYGTLEE LLEVITWAQL GIHRKPVGLL NVDGYYNSLL TFIDKAVDEG FISPMARRII VSAPNAKELV RQLEEYEPEF DEITSKLVWD
201: EVDRISYVPG SEVATAT

Arabidopsis Description

LOG7Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 [Source:UniProtKB/Swiss-Prot;Acc:Q8GW29]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.