Factsheet for TraesCS3A01G211100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G241600.1	Wheat	cytosol	98.29	96.23
TraesCS3D01G213900.1	Wheat	cytosol	98.29	95.44
Os01t0588900-01	Rice	cytosol	85.9	83.06
EES03190	Sorghum	cytosol	84.19	78.49
Zm00001d011246_P002	Maize	cytosol	79.91	73.33
VIT_08s0007g02480.t01	Wine grape	cytosol	66.24	71.76
KRH32819	Soybean	cytosol	65.38	71.5
Solyc01g007270.1.1	Tomato	cytosol	21.37	71.43
KRH72214	Soybean	cytosol	64.96	71.03
GSMUA_Achr8P04060_001	Banana	cytosol	67.52	69.91
KRG96247	Soybean	cytosol	63.25	69.48
KRH67989	Soybean	cytosol	63.25	69.48
GSMUA_Achr2P08380_001	Banana	cytosol	67.95	69.43
CDY04985	Canola	cytosol	62.39	67.91
TraesCS4A01G054500.1	Wheat	mitochondrion	19.66	67.65
TraesCS1A01G156100.1	Wheat	mitochondrion	59.4	66.83
Solyc10g082020.1.1	Tomato	cytosol	61.97	66.82
AT5G06300.1	Thale cress	cytosol	61.97	66.82
HORVU3Hr1G050770.10	Barley	mitochondrion	97.86	65.62
PGSC0003DMT400042349	Potato	cytosol	60.68	65.14
TraesCS4A01G413200.1	Wheat	mitochondrion	56.41	64.08
PGSC0003DMT400072345	Potato	cytosol	61.54	63.16
GSMUA_Achr6P35930_001	Banana	cytosol	58.97	61.88
TraesCS2A01G380600.1	Wheat	cytosol	61.97	58.94
TraesCS5A01G347400.1	Wheat	cytosol	59.83	56.91
TraesCS4A01G317900.1	Wheat	plastid	58.97	56.33
TraesCS5A01G347500.1	Wheat	cytosol	58.97	56.33
TraesCS1A01G362500.1	Wheat	cytosol	50.85	55.35
TraesCS4A01G318100.1	Wheat	plastid	57.69	54.44
TraesCS4A01G277200.1	Wheat	cytosol	50.43	53.15
TraesCS3A01G251500.1	Wheat	plastid	51.71	52.84
Bra028735.1-P	Field mustard	cytosol	16.67	30.95

Protein Annotations

EnsemblPlants:TraesCS3A01G211100.1	EnsemblPlantsGene:TraesCS3A01G211100	Gene3D:3.40.50.450	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0048509	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF13	PFAM:PF03641	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2	:

Description

No Description!

Coordinates

chr3A:-:377799526..377803088

Molecular Weight (calculated)

25267.3 Da

IEP (calculated)

5.013

GRAVY (calculated)

-0.017

Length

234 amino acids

Sequence
(BLAST)

001: MAVEATAEKN TGAAAPESGD RRSRFRRICV YCGSAKGRKA SYQDAAVELG KELVERGIDL VYGGGSIGLM GLVSHAVHDG GRHVIGVIPK SLMPREVTGE
101: PVGEVRAVSG MHERKAEMVR SADAFIALPG GYGTLDELLE VLTWAQLGIH KKPIGLLNVD GFYNFFLSFI DMAVSEGFIQ EDARHLVISA PTAKELVLKL
201: EEYVPDYEIG LVWEDQGQIT HGFVPELEPG IASS

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.