CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	nucleus
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0588900-01	Rice	cytosol	83.67	86.78
TraesCS3A01G211100.1	Wheat	cytosol	78.49	84.19
Zm00001d011246_P002	Maize	cytosol	85.26	83.92
TraesCS3B01G241600.1	Wheat	cytosol	78.88	82.85
TraesCS3D01G213900.1	Wheat	cytosol	78.88	82.16
KXG22670	Sorghum	plastid	78.09	75.38
VIT_08s0007g02480.t01	Wine grape	cytosol	64.54	75.0
KRH32819	Soybean	cytosol	62.95	73.83
KRH72214	Soybean	cytosol	62.55	73.36
KRG96247	Soybean	cytosol	62.15	73.24
KRH67989	Soybean	cytosol	62.15	73.24
GSMUA_Achr8P04060_001	Banana	cytosol	65.74	73.01
CDY04985	Canola	cytosol	61.75	72.09
Solyc01g007270.1.1	Tomato	cytosol	19.92	71.43
GSMUA_Achr2P08380_001	Banana	cytosol	64.94	71.18
Solyc10g082020.1.1	Tomato	cytosol	61.35	70.97
AT5G06300.1	Thale cress	cytosol	61.35	70.97
EER94070	Sorghum	mitochondrion	58.17	70.53
PGSC0003DMT400042349	Potato	cytosol	59.36	68.35
PGSC0003DMT400072345	Potato	cytosol	60.56	66.67
GSMUA_Achr6P35930_001	Banana	cytosol	57.77	65.02
EES05457	Sorghum	cytosol	60.96	62.7
EER97131	Sorghum	cytosol	56.97	60.85
OQU88832	Sorghum	cytosol, plastid	53.78	59.21
EER94862	Sorghum	mitochondrion, plastid	51.0	58.45
EES11120	Sorghum	cytosol	59.36	57.53
HORVU3Hr1G050770.10	Barley	mitochondrion	78.88	56.73
EES18588	Sorghum	cytosol	51.39	55.84
EER93620	Sorghum	cytosol	49.4	53.45
OQU87402	Sorghum	plastid	52.19	49.81
EER93059	Sorghum	cytosol	34.66	47.8
Bra028735.1-P	Field mustard	cytosol	17.13	34.13

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8082460	UniProt:C5XPH7	EnsemblPlants:EES03190	ProteinID:EES03190
ProteinID:EES03190.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	GO:GO:0048509	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF13	EnsemblPlantsGene:SORBI_3003G202200	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001A84E41	RefSeq:XP_002458070.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:53189808..53194411

Molecular Weight (calculated)

26561.1 Da

IEP (calculated)

4.895

GRAVY (calculated)

0.100

Length

251 amino acids

Sequence
(BLAST)

001: MEMDAAVAAK SGGVTGVVAA AAAQAGMNGG ERRSRFQRIC VYCGSAKGRK PSYQDAAVEL GNELVERGID LVYGGGSIGL MGLVSHAVHD GGRHVIGVIP
101: KSLMPREVTG EPVGEVRAVS GMHERKAEMA RFADAFIALP GGYGTLEELL EVITWAQLGI HKKPVGLLNV DGFYDPLLSF IDMAVNEGFI KEDARRIIIS
201: APTAKELVLK LEEYVPEYEV GLVWEDQMPA AVAATAAHGF APELEPGIAS S

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.