CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
endoplasmic reticulum 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d021450_P001	Maize	cytosol	94.47	95.69
OQU88832	Sorghum	cytosol, plastid	88.51	91.23
TraesCS5B01G348400.1	Wheat	cytosol	85.96	82.11
TraesCS5A01G347400.1	Wheat	cytosol	84.68	80.89
TraesCS5D01G353600.1	Wheat	cytosol	84.68	79.92
TraesCS5B01G348300.1	Wheat	cytosol	83.83	78.8
GSMUA_Achr2P03620_001	Banana	cytosol	73.19	78.54
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	72.34	77.63
GSMUA_Achr7P04070_001	Banana	cytosol	70.21	76.74
GSMUA_AchrUn_...	Banana	cytosol	65.96	76.73
TraesCS5A01G347500.1	Wheat	cytosol	79.57	76.33
TraesCS5B01G348600.1	Wheat	cytosol	77.45	75.52
Os09t0547500-01	Rice	cytosol, plastid	71.06	73.57
VIT_18s0001g00210.t01	Wine grape	cytosol	68.51	73.52
VIT_03s0038g03420.t01	Wine grape	cytosol	70.64	72.49
EER94070	Sorghum	mitochondrion	63.4	71.98
AT4G35190.1	Thale cress	cytosol	66.81	68.86
GSMUA_AchrUn_...	Banana	cytosol	72.34	68.83
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	23.4	68.75
CDX76318	Canola	cytosol	66.38	68.42
Bra020803.1-P	Field mustard	cytosol	65.96	67.98
Bra011592.1-P	Field mustard	cytosol	67.66	67.95
CDX69118	Canola	cytosol	64.68	67.86
CDY52642	Canola	cytosol	67.23	67.52
CDY17522	Canola	cytosol	60.43	62.01
EES05457	Sorghum	cytosol	64.26	61.89
EES11120	Sorghum	cytosol	64.68	58.69
EER94862	Sorghum	mitochondrion, plastid	54.04	57.99
EES03190	Sorghum	cytosol	60.85	56.97
EES18588	Sorghum	cytosol	54.47	55.41
KXG22670	Sorghum	plastid	60.0	54.23
EER93620	Sorghum	cytosol	51.91	52.59
EER93059	Sorghum	cytosol	38.72	50.0
OQU87402	Sorghum	plastid	54.04	48.29
KRH32487	Soybean	cytosol	3.4	42.11

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8067448	UniProt:C5X723	EnsemblPlants:EER97131	ProteinID:EER97131
ProteinID:EER97131.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF14
EnsemblPlantsGene:SORBI_3002G286400	SUPFAM:SSF102405	unigene:Sbi.18773	TIGRFAMs:TIGR00730	UniParc:UPI0001A83A08	RefSeq:XP_002460610.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:66617980..66621081

Molecular Weight (calculated)

24875.5 Da

IEP (calculated)

4.699

GRAVY (calculated)

-0.071

Length

235 amino acids

Sequence
(BLAST)

001: MEAEGAAAAA ENGGAGKGSD SGSRFRRVCV FCGSSSGKRS SYRDAAVELG KELVARKVDL VYGGGSLGLM GEVSEAVHKG GGHVIGVIPT TLMGKEITGE
101: TVGEVRAVAG MHQRKAEMAR NSDAFIALPG GYGTLDELLE VIAWAQLGIH SKPVGLLNVD GYYDFLLAFI DKAVDDGFIK PSQRHIFVSA PDASELVQKL
201: EEYEAVQDED PATPKLCWEI EQVGYNASLL AEIAR

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.