Factsheet for TraesCS5B01G348600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G347500.1	Wheat	cytosol	87.55	86.12
TraesCS5B01G348400.1	Wheat	cytosol	87.55	85.77
TraesCS5B01G348300.1	Wheat	cytosol	87.97	84.8
EER97131	Sorghum	cytosol	75.52	77.45
Zm00001d021450_P001	Maize	cytosol	74.27	77.16
GSMUA_AchrUn_...	Banana	cytosol	61.83	73.76
OQU88832	Sorghum	cytosol, plastid	68.88	72.81
GSMUA_Achr2P03620_001	Banana	cytosol	64.73	71.23
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	63.49	69.86
GSMUA_Achr7P04070_001	Banana	cytosol	62.24	69.77
Os09t0547500-01	Rice	cytosol, plastid	64.32	68.28
TraesCS1B01G173200.1	Wheat	mitochondrion	57.68	66.83
VIT_18s0001g00210.t01	Wine grape	cytosol	60.58	66.67
VIT_03s0038g03420.t01	Wine grape	cytosol	63.07	66.38
TraesCS4B01G250400.1	Wheat	mitochondrion	53.94	63.41
TraesCS4B01G313800.1	Wheat	mitochondrion	53.53	62.93
AT4G35190.1	Thale cress	cytosol	58.92	62.28
GSMUA_AchrUn_...	Banana	cytosol	63.07	61.54
CDX69118	Canola	cytosol	56.43	60.71
CDX76318	Canola	cytosol	57.26	60.53
TraesCS1B01G379700.1	Wheat	cytosol	53.94	60.47
Bra020803.1-P	Field mustard	cytosol	56.85	60.09
Bra011592.1-P	Field mustard	cytosol	58.09	59.83
CDY52642	Canola	cytosol	57.68	59.4
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	19.5	58.75
TraesCS3B01G241600.1	Wheat	cytosol	55.19	55.65
CDY17522	Canola	cytosol	51.45	54.15
TraesCS5B01G561400.1	Wheat	plastid	54.77	53.44
TraesCS3B01G281000.1	Wheat	cytosol	49.79	53.1
TraesCS5B01G561300.1	Wheat	plastid	54.77	52.8
TraesCS4B01G035700.1	Wheat	cytosol	48.13	51.33
TraesCS1B01G471300.1	Wheat	cytosol, plastid	56.85	51.12
TraesCS2B01G397600.2	Wheat	cytosol	56.02	48.21
KRH32487	Soybean	cytosol	3.73	47.37

Protein Annotations

EnsemblPlants:TraesCS5B01G348600.1	EnsemblPlantsGene:TraesCS5B01G348600	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5B:+:529987428..529988899

Molecular Weight (calculated)

25632.6 Da

IEP (calculated)

4.915

GRAVY (calculated)

-0.012

Length

241 amino acids

Sequence
(BLAST)

001: MEETAAAKNR SGGVGEGAVV EVEVEEGPRF RRVCVFCGSS SGKRSSYRDA AVELGRELVA RGMGLVYGGG SLGLMGEVSE SVHKAGGHVI GVIPTALMGK
101: EITGETVGEV VAVSGMHERK AAMARNADAF IALPGGYGTL DELLEVITWA QLGIHTKPVG LLNVEGYYDF LLAFIDKAVD DGFIRPAHLH IFVSASDARD
201: LVRKLEEYVA VEEDDPAAPK LRWEIGKVGY NATPADRSTL N

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.