Factsheet for GSMUA_Achr1P07310_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
endoplasmic reticulum 1
mitochondrion 4
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr2P03620_001	Banana	cytosol	93.61	93.61
GSMUA_Achr7P04070_001	Banana	cytosol	82.65	84.19
GSMUA_AchrUn_...	Banana	cytosol	77.17	83.66
GSMUA_AchrUn_...	Banana	cytosol	92.69	82.19
VIT_18s0001g00210.t01	Wine grape	cytosol	78.54	78.54
VIT_03s0038g03420.t01	Wine grape	cytosol	80.82	77.29
GSMUA_Achr1P09040_001	Banana	cytosol	72.6	72.94
GSMUA_Achr6P36490_001	Banana	cytosol	72.15	72.81
Zm00001d021450_P001	Maize	cytosol	76.71	72.41
EER97131	Sorghum	cytosol	77.63	72.34
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	26.03	71.25
AT4G35190.1	Thale cress	cytosol	73.52	70.61
OQU88832	Sorghum	cytosol, plastid	72.6	69.74
CDX69118	Canola	cytosol	70.32	68.75
CDX76318	Canola	cytosol	71.23	68.42
Bra011592.1-P	Field mustard	cytosol	73.06	68.38
Bra020803.1-P	Field mustard	cytosol	70.78	67.98
CDY52642	Canola	cytosol	72.6	67.95
TraesCS5A01G347400.1	Wheat	cytosol	76.26	67.89
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	47.95	67.74
TraesCS5B01G348400.1	Wheat	cytosol	75.34	67.07
GSMUA_Achr11P...	Banana	cytosol, plastid	66.67	66.67
TraesCS5D01G353600.1	Wheat	cytosol	75.34	66.27
Os09t0547500-01	Rice	cytosol, plastid	68.04	65.64
TraesCS5B01G348300.1	Wheat	cytosol	74.89	65.6
GSMUA_Achr8P19190_001	Banana	cytosol	66.67	65.18
TraesCS5A01G347500.1	Wheat	cytosol	71.69	64.08
TraesCS5B01G348600.1	Wheat	cytosol	69.86	63.49
CDY17522	Canola	cytosol	64.38	61.57
GSMUA_Achr2P00980_001	Banana	cytosol	69.41	61.54
GSMUA_Achr2P08380_001	Banana	cytosol	63.47	60.7
GSMUA_Achr8P04060_001	Banana	cytosol	62.56	60.62
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	52.97	58.88
GSMUA_Achr3P25920_001	Banana	cytosol	56.62	57.94
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	51.6	57.07
GSMUA_Achr8P31460_001	Banana	cytosol	52.97	54.98
GSMUA_Achr6P35930_001	Banana	cytosol	54.34	53.36
KRH32487	Soybean	cytosol	4.57	52.63
GSMUA_Achr2P08480_001	Banana	mitochondrion	58.9	50.99
GSMUA_Achr4P03590_001	Banana	plastid	54.34	48.18

Protein Annotations

EnsemblPlants:GSMUA_Achr1P07310_001	EnsemblPlants:GSMUA_Achr1T07310_001	EnsemblPlantsGene:GSMUA_Achr1G07310_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000294F003	UniProt:M0RXT9	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Source:GMGC_GENE;Acc:GSMUA_Achr1G07310_001]

Coordinates

chr1:-:5740399..5741889

Molecular Weight (calculated)

23823.9 Da

IEP (calculated)

6.397

GRAVY (calculated)

0.017

Length

219 amino acids

Sequence
(BLAST)

001: MAEVKLGNSR FKRVCVFCGS STGKRNCYQD AAVELGKELV ARKVDLVYGG GSVGLMGLVS EAVHHGGGHV IGIIPRTLMA KEITGETLGE VKPVASMHQR
101: KAEMARHSDA FIALPGGYGT LEELLEVITW AQLGIHNKPV GLLNVDGYYN SLLAFIDKAV EDGFIQPYQR HIFVSAPTAN DLVQKLEEYV PVEDAVVAKL
201: SWEMEQVGLK STLQAEITR

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.