Factsheet for GSMUA_Achr8P31460_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
nucleus 1
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	75.83	81.22
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	71.09	75.76
VIT_13s0064g00740.t01	Wine grape	cytosol	72.04	70.7
KRH32950	Soybean	cytosol	65.88	67.8
KRH39935	Soybean	cytosol	68.25	64.57
GSMUA_Achr4P03590_001	Banana	plastid	72.99	62.35
TraesCS4A01G277200.1	Wheat	cytosol	64.93	61.71
GSMUA_Achr3P25920_001	Banana	cytosol	62.09	61.22
TraesCS4D01G033800.1	Wheat	cytosol	64.93	60.89
VIT_08s0007g08340.t01	Wine grape	cytosol	63.98	60.81
TraesCS4B01G035700.1	Wheat	cytosol	64.45	60.18
EER93620	Sorghum	cytosol	63.98	58.19
GSMUA_Achr1P09040_001	Banana	cytosol	57.82	55.96
Zm00001d033605_P001	Maize	cytosol	62.56	55.46
GSMUA_AchrUn_...	Banana	cytosol	53.08	55.45
GSMUA_Achr6P36490_001	Banana	cytosol	56.87	55.3
GSMUA_Achr7P04070_001	Banana	cytosol	54.5	53.49
GSMUA_Achr2P03620_001	Banana	cytosol	55.45	53.42
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	54.98	52.97
GSMUA_Achr2P08480_001	Banana	mitochondrion	63.51	52.96
GSMUA_Achr8P04060_001	Banana	cytosol	56.4	52.65
GSMUA_Achr11P...	Banana	cytosol, plastid	54.5	52.51
GSMUA_Achr2P08380_001	Banana	cytosol	56.4	51.97
GSMUA_Achr8P19190_001	Banana	cytosol	53.55	50.45
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	35.55	48.39
GSMUA_AchrUn_...	Banana	cytosol	56.4	48.18
GSMUA_Achr6P35930_001	Banana	cytosol	50.71	47.98
GSMUA_Achr2P00980_001	Banana	cytosol	54.03	46.15
HORVU4Hr1G005660.7	Barley	nucleus	46.45	44.34

Protein Annotations

EnsemblPlants:GSMUA_Achr8P31460_001	EnsemblPlants:GSMUA_Achr8T31460_001	EnsemblPlantsGene:GSMUA_Achr8G31460_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	ncoils:Coil	PANTHER:PTHR31223	PANTHER:PTHR31223:SF8	PFAM:PF03641
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000295FC81	UniProt:M0TV98	MapMan:11.4.1.2	:

Description

Probable cytokinin riboside 5'-monophosphate phosphoribohydrolase LOGL1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G31460_001]

Coordinates

chr8:+:33125084..33126302

Molecular Weight (calculated)

22760.5 Da

IEP (calculated)

6.288

GRAVY (calculated)

-0.184

Length

211 amino acids

Sequence
(BLAST)

001: MEASQQNAVG GGNKGRFRSI CVFCGSRHGN RTSFSEAALD LGKKLVERKI DLVYGGGSVG LMGLISKTVF DGGCNVLGVI PTALLPSEIS GETIGEVKTV
101: ADMHERKSEM AKNADAFIAL PGGYGTMEEL LEMVAWSQLG IHGKPVGILN VDGYYNDLLA LFKKGVEEGF IEDSASQIVV SADNAEDLIR KMEERLGEKR
201: MRETSKKRKI S

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.