CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH39935	Soybean	cytosol	84.39	77.58
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	66.83	69.54
KRH15578	Soybean	cytosol	24.88	67.11
GSMUA_Achr8P31460_001	Banana	cytosol	67.8	65.88
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	63.41	65.66
KRH15614	Soybean	cytosol, extracellular, plastid	21.46	63.77
VIT_08s0007g08340.t01	Wine grape	cytosol	68.78	63.51
KRH29895	Soybean	cytosol	66.83	62.27
KRH22873	Soybean	cytosol	63.41	62.2
KRH26448	Soybean	cytosol	62.93	61.72
KRG95991	Soybean	cytosol	65.37	61.19
KRH67693	Soybean	cytosol	65.37	61.19
KRH19875	Soybean	cytosol	64.39	60.27
KRH52208	Soybean	cytosol	62.44	60.09
KRH05931	Soybean	cytosol	62.93	60.0
KRH05430	Soybean	cytosol	62.93	59.72
KRH17410	Soybean	cytosol	61.95	59.62
KRH25030	Soybean	cytosol	66.83	58.8
KRG96247	Soybean	cytosol	60.49	58.22
KRH67989	Soybean	cytosol	60.49	58.22
KRH32819	Soybean	cytosol	60.49	57.94
KRH51716	Soybean	cytosol	62.44	57.92
KRH72214	Soybean	cytosol	60.0	57.48
TraesCS4D01G033800.1	Wheat	cytosol	62.44	56.89
TraesCS4A01G277200.1	Wheat	cytosol	61.46	56.76
TraesCS4B01G035700.1	Wheat	cytosol	62.44	56.64
KRH61527	Soybean	cytosol	61.95	56.44
EER93620	Sorghum	cytosol	63.41	56.03
KRH61054	Soybean	cytosol	60.98	55.56
GSMUA_Achr4P03590_001	Banana	plastid	66.34	55.06
KRH07771	Soybean	cytosol	19.51	54.79
KRH32483	Soybean	cytosol, golgi, mitochondrion	46.83	53.04
Zm00001d033605_P001	Maize	cytosol	60.98	52.52
KRH32487	Soybean	cytosol	4.39	47.37
HORVU4Hr1G005660.7	Barley	nucleus	46.34	42.99

Protein Annotations

EntrezGene:100783827	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:ACUP02006209	EnsemblPlantsGene:GLYMA_10G089000	GO:GO:0003674
GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150
GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	UniProt:I1L9R4
EnsemblPlants:KRH32950	ProteinID:KRH32950	ProteinID:KRH32950.1	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF8	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000296D025	:

Description

hypothetical protein

Coordinates

chr10:+:11868632..11870665

Molecular Weight (calculated)

22429.3 Da

IEP (calculated)

4.840

GRAVY (calculated)

0.078

Length

205 amino acids

Sequence
(BLAST)

001: MEGEGKVSAE NENQNRFKRI CVFCGSRVGY KSAFSDAALE LGKLMVERRI DLVYGGGRLG LMGLISQTVL NGGCHVLGVI PEALLPREIS GETFGEVKTV
101: ADMHERKSTM FEHADAFIAL PGGYGTMEEL LEVIAWSQLG IHDKPVGLFN VDGYFNSLLS LFDKGVEEGF IENSARHVMV IADTAIELIK KMEEYVPVLG
201: MVAPK

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.