CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH52208	Soybean	cytosol	91.56	96.71
KRH15578	Soybean	cytosol	29.33	86.84
KRH05430	Soybean	cytosol	81.33	84.72
VIT_04s0008g01040.t01	Wine grape	cytosol	78.22	81.11
Bra008924.1-P	Field mustard	cytosol	75.56	78.7
CDX69717	Canola	cytosol	75.56	78.7
CDX97157	Canola	cytosol	75.56	78.7
AT5G11950.1	Thale cress	cytosol	74.67	77.78
Bra036562.1-P	Field mustard	cytosol	66.22	77.6
CDY19786	Canola	cytosol	65.78	77.49
CDX87066	Canola	cytosol	65.78	77.49
Bra023351.1-P	Field mustard	cytosol	74.67	77.42
Solyc08g062820.2.1	Tomato	cytosol	72.44	76.53
CDY65870	Canola	cytosol	74.22	76.26
PGSC0003DMT400021223	Potato	cytosol	72.0	76.06
CDX91185	Canola	cytosol	74.22	74.55
GSMUA_Achr3P25920_001	Banana	cytosol	70.22	73.83
KRH15614	Soybean	cytosol, extracellular, plastid	20.89	68.12
Os01t0708500-01	Rice	mitochondrion	66.22	66.82
CDY48150	Canola	mitochondrion	35.56	66.67
KRH22873	Soybean	cytosol	61.33	66.03
KRH26448	Soybean	cytosol	60.89	65.55
TraesCS3D01G251900.1	Wheat	cytosol	65.78	65.49
TraesCS3B01G281000.1	Wheat	cytosol	65.78	65.49
TraesCS3A01G251500.1	Wheat	plastid	66.22	65.07
KRG95991	Soybean	cytosol	63.11	64.84
KRH05931	Soybean	cytosol	61.78	64.65
KRH17410	Soybean	cytosol	60.89	64.32
TraesCS1B01G379700.1	Wheat	cytosol	61.33	64.19
TraesCS1A01G362500.1	Wheat	cytosol	61.33	64.19
KRH67693	Soybean	cytosol	62.22	63.93
KRH19875	Soybean	cytosol	62.22	63.93
KRH29895	Soybean	cytosol	62.22	63.64
KRH51716	Soybean	cytosol	62.22	63.35
TraesCS1D01G367400.1	Wheat	cytosol	60.44	63.26
GSMUA_Achr2P08480_001	Banana	mitochondrion	70.22	62.45
Os05t0541200-01	Rice	cytosol, plasma membrane	61.78	62.33
KRH61054	Soybean	cytosol	62.22	62.22
KRH32950	Soybean	cytosol	56.44	61.95
Zm00001d043692_P001	Maize	cytosol	65.33	61.76
KRH07771	Soybean	cytosol	20.0	61.64
KRH67989	Soybean	cytosol	58.22	61.5
KRG96247	Soybean	cytosol	58.22	61.5
KRH32819	Soybean	cytosol	58.22	61.22
AT5G26140.2	Thale cress	cytosol	44.44	60.98
KRH72214	Soybean	cytosol	57.78	60.75
EES18588	Sorghum	cytosol	62.22	60.61
KRH25030	Soybean	cytosol	62.67	60.52
KRH39935	Soybean	cytosol	59.56	60.09
Zm00001d038862_P001	Maize	cytosol, extracellular	61.78	58.9
KRH32487	Soybean	cytosol	4.89	57.89
OQU87402	Sorghum	plastid	66.22	56.65
KRH32483	Soybean	cytosol, golgi, mitochondrion	43.11	53.59
HORVU3Hr1G066810.9	Barley	mitochondrion	55.56	44.8
HORVU1Hr1G079570.13	Barley	plastid	54.67	43.31

Protein Annotations

EntrezGene:100306704	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:ACUP02002171	EMBL:BT090939	UniProt:C6T0I5
EnsemblPlantsGene:GLYMA_04G052600	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	EnsemblPlants:KRH61527	ProteinID:KRH61527	ProteinID:KRH61527.1	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001B15449

Description

hypothetical protein

Coordinates

chr4:+:4262303..4265155

Molecular Weight (calculated)

24701.0 Da

IEP (calculated)

6.152

GRAVY (calculated)

-0.073

Length

225 amino acids

Sequence
(BLAST)

001: MEEGYPRSKF KTVCVFCGSN SGNRQVFGDA AIQLGNELVK RNIDLVYGGG SVGLMGLISQ RVYDGGCHVL GIIPKALMPL EISGETVGEV RIVSDMHERK
101: AAMAQEADAF VALPGGYGTM EELLEMITWA QLGIHKKPVG LLNVDGYYNC LLALFDNGVK EGFIKPCARN IVVSATSAKE LMMKMEHYTP SHEHVAPHQS
201: WQMKQLGNIQ MQSETVIDGR FFSEN

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.