CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH05931	Soybean	cytosol	94.84	93.95
KRH15614	Soybean	cytosol, extracellular, plastid	26.76	82.61
VIT_18s0001g14030.t01	Wine grape	mitochondrion	82.16	81.02
KRH51716	Soybean	cytosol	84.04	81.0
KRH61054	Soybean	cytosol	84.51	80.0
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	81.69	77.33
Solyc04g081290.2.1	Tomato	cytosol	81.69	77.33
KRH15578	Soybean	cytosol	26.76	75.0
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	54.46	74.84
GSMUA_Achr11P...	Banana	cytosol, plastid	76.53	74.43
GSMUA_Achr8P19190_001	Banana	cytosol	76.53	72.77
KRH67989	Soybean	cytosol	70.89	70.89
KRG96247	Soybean	cytosol	70.89	70.89
KRH26448	Soybean	cytosol	69.48	70.81
KRH22873	Soybean	cytosol	69.48	70.81
KRG95991	Soybean	cytosol	72.77	70.78
KRH29895	Soybean	cytosol	71.83	69.55
KRH67693	Soybean	cytosol	71.36	69.41
KRH19875	Soybean	cytosol	70.89	68.95
KRH32819	Soybean	cytosol	68.54	68.22
KRH72214	Soybean	cytosol	68.08	67.76
AT2G35990.1	Thale cress	cytosol	67.14	67.14
GSMUA_Achr2P00980_001	Banana	cytosol	77.46	66.8
CDY40411	Canola	cytosol	66.67	66.67
Bra017270.1-P	Field mustard	cytosol	66.2	66.2
CDX79649	Canola	cytosol	56.81	65.41
CDY32063	Canola	cytosol	65.26	65.26
KRH25030	Soybean	cytosol	71.36	65.24
KRH52208	Soybean	cytosol	63.85	63.85
KRH32950	Soybean	cytosol	59.62	61.95
KRH05430	Soybean	cytosol	62.44	61.57
KRH61527	Soybean	cytosol	64.32	60.89
KRH39935	Soybean	cytosol	62.91	60.09
KRH32483	Soybean	cytosol, golgi, mitochondrion	50.23	59.12
KRH07771	Soybean	cytosol	20.19	58.9
Os03t0857900-02	Rice	nucleus	66.67	57.72
TraesCS5D01G568400.1	Wheat	plastid	62.91	57.02
HORVU5Hr1G124750.1	Barley	cytosol	65.26	56.05
TraesCS4A01G317900.1	Wheat	plastid	64.32	55.92
TraesCS5D01G568500.1	Wheat	cytosol	64.79	55.65
TraesCS5B01G561400.1	Wheat	plastid	64.32	55.47
TraesCS4A01G318100.1	Wheat	plastid	64.32	55.24
TraesCS5B01G561300.1	Wheat	plastid	64.79	55.2
KRH32487	Soybean	cytosol	4.23	47.37
EER93059	Sorghum	cytosol	39.44	46.15

Protein Annotations

EntrezGene:100785143	MapMan:11.4.1.2	Gene3D:3.40.50.450	EMBL:ACUP02009091	EMBL:BT097489	UniProt:C6TIK3
EnsemblPlantsGene:GLYMA_14G218100	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	EnsemblPlants:KRH17410	ProteinID:KRH17410	ProteinID:KRH17410.1	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF19	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001B16C32
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr14:+:48333600..48339146

Molecular Weight (calculated)

23429.5 Da

IEP (calculated)

6.149

GRAVY (calculated)

-0.025

Length

213 amino acids

Sequence
(BLAST)

001: MEIEQQAMKM MKSSRFRRIC VFCDTSHGKN PSYQHAAIQL AKQLVERNID LVYGGGSIGL MGLISQVVFD GGRHVLGVIP TTLMPIEITG ESVGEVRAVS
101: GMHQRKAEMA READAFIALP GGYGTLEELL EVITWAQLGI HDKPVGLLNV DGYYNSLLSF MDNAVDQGFI TPAARHIIVS AQTAQDLISK LEEYVPKHCG
201: VAPKQSWEMN QQL

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.