Factsheet for GSMUA_Achr8P19190_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, plastid	86.61	88.58
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	56.7	81.94
VIT_18s0001g14030.t01	Wine grape	mitochondrion	78.57	81.48
Solyc04g081290.2.1	Tomato	cytosol	79.02	78.67
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	79.02	78.67
KRH05931	Soybean	cytosol	74.55	77.67
GSMUA_Achr2P00980_001	Banana	cytosol	85.27	77.33
KRH17410	Soybean	cytosol	72.77	76.53
GSMUA_Achr6P36490_001	Banana	cytosol	74.11	76.5
KRH51716	Soybean	cytosol	75.45	76.47
KRH61054	Soybean	cytosol	74.55	74.22
GSMUA_Achr1P09040_001	Banana	cytosol	71.88	73.85
GSMUA_AchrUn_...	Banana	cytosol	62.5	69.31
GSMUA_Achr8P04060_001	Banana	cytosol	68.75	68.14
AT2G35990.1	Thale cress	cytosol	64.29	67.61
Bra017270.1-P	Field mustard	cytosol	63.84	67.14
CDY40411	Canola	cytosol	63.84	67.14
GSMUA_Achr7P04070_001	Banana	cytosol	64.29	66.98
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	65.18	66.67
CDX79649	Canola	cytosol	54.91	66.49
GSMUA_Achr2P08380_001	Banana	cytosol	67.86	66.38
GSMUA_Achr2P03620_001	Banana	cytosol	64.73	66.21
CDY32063	Canola	cytosol	62.5	65.73
TraesCS4A01G318100.1	Wheat	plastid	70.98	64.11
HORVU5Hr1G124750.1	Barley	cytosol	70.54	63.71
GSMUA_Achr3P25920_001	Banana	cytosol	60.71	63.55
TraesCS5D01G568400.1	Wheat	plastid	66.52	63.4
TraesCS5D01G568500.1	Wheat	cytosol	70.09	63.31
TraesCS5B01G561400.1	Wheat	plastid	69.64	63.16
TraesCS4A01G317900.1	Wheat	plastid	68.75	62.86
TraesCS5B01G561300.1	Wheat	plastid	70.09	62.8
Os03t0857900-02	Rice	nucleus	68.75	62.6
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	54.02	61.42
GSMUA_Achr6P35930_001	Banana	cytosol	59.82	60.09
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	52.68	59.6
GSMUA_AchrUn_...	Banana	cytosol	65.18	59.11
GSMUA_Achr2P08480_001	Banana	mitochondrion	60.71	53.75
GSMUA_Achr8P31460_001	Banana	cytosol	50.45	53.55
EER93059	Sorghum	cytosol	41.96	51.65
GSMUA_Achr4P03590_001	Banana	plastid	54.91	49.8

Protein Annotations

EnsemblPlants:GSMUA_Achr8P19190_001	EnsemblPlants:GSMUA_Achr8T19190_001	EnsemblPlantsGene:GSMUA_Achr8G19190_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF19	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000296C040	UniProt:M0TRS2	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Source:GMGC_GENE;Acc:GSMUA_Achr8G19190_001]

Coordinates

chr8:-:24200001..24201482

Molecular Weight (calculated)

24347.3 Da

IEP (calculated)

6.512

GRAVY (calculated)

-0.133

Length

224 amino acids

Sequence
(BLAST)

001: MEAEAQALMS KRSTASRFRR VCVFCGSSPG RKPSYQLAAI QLGHELVRRN IDLVYGGGSV GLMGLVSQAV HDGGRHVLGV IPRTLMPREI TGDTVGEVRA
101: VSGMHQRKAE MASQADAFIA LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVDGYYDSLL SFIDKAVDEG FIAPAARHII ISAQTSHELL SELEDYQPMH
201: DGVAPQLSWE RERLGQSPKS NIGR

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.