Factsheet for GSMUA_Achr4P03590_001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 3
endoplasmic reticulum 1
plastid 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	64.78	80.81
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	63.97	80.2
GSMUA_Achr8P31460_001	Banana	cytosol	62.35	72.99
VIT_13s0064g00740.t01	Wine grape	cytosol	61.54	70.7
KRH39935	Soybean	cytosol	60.32	66.82
KRH32950	Soybean	cytosol	55.06	66.34
GSMUA_Achr3P25920_001	Banana	cytosol	54.66	63.08
TraesCS4A01G277200.1	Wheat	cytosol	56.68	63.06
VIT_08s0007g08340.t01	Wine grape	cytosol	56.28	62.61
TraesCS4D01G033800.1	Wheat	cytosol	55.87	61.33
EER93620	Sorghum	cytosol	57.09	60.78
TraesCS4B01G035700.1	Wheat	cytosol	55.47	60.62
GSMUA_Achr1P09040_001	Banana	cytosol	51.82	58.72
GSMUA_Achr6P36490_001	Banana	cytosol	51.01	58.06
GSMUA_AchrUn_...	Banana	cytosol	47.37	57.92
Zm00001d033605_P001	Maize	cytosol	54.66	56.72
GSMUA_Achr7P04070_001	Banana	cytosol	48.58	55.81
GSMUA_Achr8P04060_001	Banana	cytosol	51.01	55.75
GSMUA_Achr2P08380_001	Banana	cytosol	51.42	55.46
GSMUA_Achr2P03620_001	Banana	cytosol	48.99	55.25
GSMUA_Achr11P...	Banana	cytosol, plastid	48.99	55.25
GSMUA_Achr8P19190_001	Banana	cytosol	49.8	54.91
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	48.18	54.34
GSMUA_Achr2P08480_001	Banana	mitochondrion	55.06	53.75
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	32.79	52.26
GSMUA_Achr2P00980_001	Banana	cytosol	50.61	50.61
GSMUA_AchrUn_...	Banana	cytosol	49.8	49.8
GSMUA_Achr6P35930_001	Banana	cytosol	44.53	49.33
HORVU4Hr1G005660.7	Barley	nucleus	38.87	43.44

Protein Annotations

EnsemblPlants:GSMUA_Achr4P03590_001	EnsemblPlants:GSMUA_Achr4T03590_001	EnsemblPlantsGene:GSMUA_Achr4G03590_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	ncoils:Coil	PANTHER:PTHR31223	PANTHER:PTHR31223:SF8	PFAM:PF03641
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002960420	UniProt:M0SKS6	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Source:GMGC_GENE;Acc:GSMUA_Achr4G03590_001]

Coordinates

chr4:+:2858982..2860288

Molecular Weight (calculated)

26905.2 Da

IEP (calculated)

4.697

GRAVY (calculated)

-0.025

Length

247 amino acids

Sequence
(BLAST)

001: MEAGEPNVVE SSGSGSTGKF RRICVFCGSR SGNRPSFSQA ALDLGKQLVE RKIDLVYGGG SAGLMGLVSK TVFDGGCHVL GVVPTALLPN EVSGETIGDL
101: IKVADMHERK SEMAKCADAF IALPGGYGTM EELLEIIAHS QLGIHHKPVG LLNVDGYYDS LLALFDKGVE QGFIEDSARH IVASAESAEE LLRKMEEDVP
201: LDDSRQRWQV DQLMVVYAQR EWAYCSDVAD FTTLFCVSMY KYCLHLS

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.