Factsheet for Zm00001d033605_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER93620	Sorghum	cytosol	89.08	91.38
TraesCS4D01G033800.1	Wheat	cytosol	77.31	81.78
TraesCS4A01G277200.1	Wheat	cytosol	76.05	81.53
TraesCS4B01G035700.1	Wheat	cytosol	76.89	80.97
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	57.14	69.04
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	55.46	66.67
GSMUA_Achr8P31460_001	Banana	cytosol	55.46	62.56
VIT_13s0064g00740.t01	Wine grape	cytosol	55.46	61.4
KRH32950	Soybean	cytosol	52.52	60.98
Zm00001d014016_P001	Maize	mitochondrion, nucleus	52.1	59.9
KRH39935	Soybean	cytosol	55.46	59.19
HORVU4Hr1G005660.7	Barley	nucleus	52.94	57.01
GSMUA_Achr4P03590_001	Banana	plastid	56.72	54.66
VIT_08s0007g08340.t01	Wine grape	cytosol	50.0	53.6
Zm00001d029127_P001	Maize	mitochondrion	50.42	52.86
Zm00001d038862_P001	Maize	cytosol, extracellular	51.26	51.69
Zm00001d021450_P001	Maize	cytosol	50.0	51.29
Zm00001d003013_P001	Maize	cytosol	53.36	51.0
Zm00001d025868_P002	Maize	cytosol	53.78	50.59
Zm00001d043692_P001	Maize	cytosol	50.42	50.42
Zm00001d011246_P002	Maize	cytosol	50.84	47.45
Zm00001d039174_P001	Maize	plastid	50.0	44.91
Zm00001d044327_P001	Maize	plastid	31.93	29.46

Protein Annotations

EntrezGene:100282620	MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:B6T9H8	EMBL:EU961643	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	GO:GO:0016829	InterPro:LOG	InterPro:LOG_fam	ProteinID:ONM08016.1	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF25	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00003FF859	EnsemblPlantsGene:Zm00001d033605
EnsemblPlants:Zm00001d033605_P001	EnsemblPlants:Zm00001d033605_T001	SEG:seg	:	:	:

Description

Carboxy-lyase

Coordinates

chr1:+:268442389..268444600

Molecular Weight (calculated)

25122.9 Da

IEP (calculated)

4.876

GRAVY (calculated)

-0.189

Length

238 amino acids

Sequence
(BLAST)

001: MEENQEKFAP ESSGGDGGGS VRTICVFCGS RPGNRPSFSA AALDLGKQLV ERQMNLVYGG GSGGLMGLVS KAVYEGGRHV LGVIPTALLP EEVSGETLGE
101: VKVVRDMHQR KAEMAKHADA FIALPGGYGT IEELLEIIAW AQLGIHSKPV GLLNVDGYYN SLLSLFDKAV EEGFIDTKAR NIFVLADTAA DLLTRLTMMA
201: RLAADDDDAT TTPRGDGDGD GDEHKGATTA AGVKRKRG

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.