Factsheet for Zm00001d039174_P001

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plastid
Predotar:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG22670	Sorghum	plastid	84.15	85.77
Os05t0591600-01	Rice	cytosol	78.11	77.82
TraesCS1D01G444500.1	Wheat	cytosol	75.47	73.26
TraesCS1B01G471300.1	Wheat	cytosol, plastid	73.21	72.39
VIT_08s0007g02480.t01	Wine grape	cytosol	58.49	71.76
KRH32819	Soybean	cytosol	57.36	71.03
Zm00001d011246_P002	Maize	cytosol	68.3	70.98
GSMUA_Achr8P04060_001	Banana	cytosol	60.38	70.8
GSMUA_Achr2P08380_001	Banana	cytosol	61.13	70.74
KRH72214	Soybean	cytosol	56.98	70.56
KRG96247	Soybean	cytosol	56.23	69.95
KRH67989	Soybean	cytosol	56.23	69.95
CDY04985	Canola	cytosol	56.6	69.77
AT5G06300.1	Thale cress	cytosol	56.23	68.66
Solyc01g007270.1.1	Tomato	cytosol	18.11	68.57
Solyc10g082020.1.1	Tomato	cytosol	55.47	67.74
Zm00001d014016_P001	Maize	mitochondrion, nucleus	52.83	67.63
HORVU1Hr1G094290.7	Barley	plastid	72.08	66.55
PGSC0003DMT400042349	Potato	cytosol	53.21	64.68
PGSC0003DMT400072345	Potato	cytosol	54.72	63.6
GSMUA_Achr6P35930_001	Banana	cytosol	52.45	62.33
Zm00001d029127_P001	Maize	mitochondrion	52.08	60.79
Zm00001d021450_P001	Maize	cytosol	53.21	60.78
Zm00001d003013_P001	Maize	cytosol	53.96	57.43
Zm00001d025868_P002	Maize	cytosol	53.21	55.73
Zm00001d043692_P001	Maize	cytosol	47.55	52.94
Zm00001d038862_P001	Maize	cytosol, extracellular	45.66	51.27
Zm00001d033605_P001	Maize	cytosol	44.91	50.0
Zm00001d044327_P001	Maize	plastid	44.15	45.35

Protein Annotations

EntrezGene:100194047	MapMan:11.4.1.2	Gene3D:3.40.50.450	ProteinID:AQK88981.1	UniProt:B4FH85	EMBL:BT036473
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	GO:GO:0016829	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF13	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00017B696D	EnsemblPlantsGene:Zm00001d039174
EnsemblPlants:Zm00001d039174_P001	EnsemblPlants:Zm00001d039174_T001	SEG:seg	:	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7

Coordinates

chr6:-:171784068..171787645

Molecular Weight (calculated)

27677.2 Da

IEP (calculated)

5.006

GRAVY (calculated)

0.114

Length

265 amino acids

Sequence
(BLAST)

001: MTPATAVAVA SEACVLSDST VASSSSTAET AAARAEVPAA GSTDETGSGG GGAAERRSRF RRICVYCGSA KGKKASYQDA AIDLGNQLVE RGIDLVYGGG
101: SIGLMGLVSH AVHAGGRHVM GIIPKSLMPI EVTGEPVGEV RAVSGMHERK AEMARFADAF VALPGGYGTL EELLEIITWA QLGIHKKPVG LLNVDGFYDP
201: LLSFIDLAVR EGFVSEAARR IIISAPTAKE LVMKLEDYVP EYDVGLVWEE QKPNSLVPAA GITSS

Best Arabidopsis Sequence Match ( AT2G35990.1 )
(BLAST)

001: MEETKSRFRR ICVFCGSSSG NKTTYHDAAL QLAHQLVERN IDLVYGGGSV GLMGLISQAV HDGGRHVLGI IPKSLAPREI TGESIGEVIT VSTMHQRKAE
101: MGRQADAFIA LPGGYGTFEE LLEVITWSQL GIHTKPVGLL NVDGFYDSLL TFIDKAVDEG FVSSTARRII VSAPNAPQLL QLLEEYVPKH DDFVSKMVWD
201: NTTDAFTLEG DSF

Arabidopsis Description

LOG2Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG2 [Source:UniProtKB/Swiss-Prot;Acc:Q5BPS0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.