Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER94862 | Sorghum | mitochondrion, plastid | 80.18 | 83.11 |
| Zm00001d014016_P001 | Maize | mitochondrion, nucleus | 69.16 | 75.85 |
| Os03t0109300-01 | Rice | mitochondrion | 70.04 | 75.36 |
| TraesCS4B01G250400.1 | Wheat | mitochondrion | 66.96 | 74.15 |
| TraesCS4A01G413200.1 | Wheat | mitochondrion | 66.96 | 73.79 |
| TraesCS4D01G310800.1 | Wheat | mitochondrion | 66.52 | 73.66 |
| TraesCS4B01G313800.1 | Wheat | mitochondrion | 65.64 | 72.68 |
| GSMUA_Achr6P36490_001 | Banana | cytosol | 68.28 | 71.43 |
| VIT_06s0004g02680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 66.08 | 70.75 |
| Solyc09g007830.2.1 | Tomato | cytosol | 67.84 | 70.64 |
| PGSC0003DMT400055525 | Potato | cytosol | 67.84 | 70.64 |
| TraesCS4D01G250300.1 | Wheat | mitochondrion | 21.15 | 70.59 |
| VIT_08s0040g01780.t01 | Wine grape | cytosol | 67.4 | 70.18 |
| AT5G03270.1 | Thale cress | cytosol | 62.11 | 70.15 |
| Bra003135.1-P | Field mustard | cytosol | 51.54 | 70.06 |
| Bra017202.1-P | Field mustard | cytosol | 64.76 | 70.0 |
| KRH15578 | Soybean | cytosol | 23.35 | 69.74 |
| GSMUA_Achr1P09040_001 | Banana | cytosol | 66.96 | 69.72 |
| Bra034399.1-P | Field mustard | cytosol | 65.2 | 69.48 |
| Bra023107.1-P | Field mustard | cytosol | 63.0 | 69.42 |
| TraesCS4A01G054500.1 | Wheat | mitochondrion | 20.7 | 69.12 |
| Solyc10g084150.1.1 | Tomato | cytosol | 66.96 | 69.09 |
| CDY44352 | Canola | cytosol | 61.67 | 68.97 |
| KRH22873 | Soybean | cytosol | 63.44 | 68.9 |
| PGSC0003DMT400027157 | Potato | cytosol | 66.52 | 68.64 |
| Solyc06g075090.2.1 | Tomato | cytosol | 57.71 | 68.59 |
| KRG95991 | Soybean | cytosol | 66.08 | 68.49 |
| KRH26448 | Soybean | cytosol | 63.0 | 68.42 |
| Bra039788.1-P | Field mustard | cytosol | 50.22 | 68.26 |
| CDY62895 | Canola | cytosol | 59.47 | 68.18 |
| Bra011962.1-P | Field mustard | cytosol | 63.88 | 68.08 |
| KRH67693 | Soybean | cytosol | 65.64 | 68.04 |
| KRH19875 | Soybean | cytosol | 65.64 | 68.04 |
| Bra007000.1-P | Field mustard | cytosol | 50.22 | 67.86 |
| TraesCS4D01G250200.1 | Wheat | mitochondrion | 33.48 | 67.26 |
| KRH29895 | Soybean | cytosol | 64.76 | 66.82 |
| KRH25030 | Soybean | cytosol | 65.2 | 63.52 |
| PGSC0003DMT400020890 | Potato | cytosol | 63.0 | 62.72 |
| Solyc11g069570.1.1 | Tomato | cytosol | 64.32 | 62.39 |
| KRH15614 | Soybean | cytosol, extracellular, plastid | 18.94 | 62.32 |
| KRH07771 | Soybean | cytosol | 19.38 | 60.27 |
| Zm00001d021450_P001 | Maize | cytosol | 60.79 | 59.48 |
| Zm00001d003013_P001 | Maize | cytosol | 63.44 | 57.83 |
| Zm00001d025868_P002 | Maize | cytosol | 63.88 | 57.31 |
| KRH32483 | Soybean | cytosol, golgi, mitochondrion | 44.93 | 56.35 |
| Zm00001d011246_P002 | Maize | cytosol | 62.11 | 55.29 |
| Zm00001d043692_P001 | Maize | cytosol | 56.39 | 53.78 |
| Zm00001d038862_P001 | Maize | cytosol, extracellular | 55.51 | 53.39 |
| Zm00001d039174_P001 | Maize | plastid | 60.79 | 52.08 |
| Zm00001d033605_P001 | Maize | cytosol | 52.86 | 50.42 |
| Zm00001d044327_P001 | Maize | plastid | 41.41 | 36.43 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | UniProt:A0A1D6K2U3 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | InterPro:LOG |
| InterPro:LOG_fam | ProteinID:ONL97991.1 | PFAM:PF03641 | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF40 | SUPFAM:SSF102405 |
| TIGRFAMs:TIGR00730 | UniParc:UPI00022162AA | EnsemblPlantsGene:Zm00001d029127 | EnsemblPlants:Zm00001d029127_P001 | EnsemblPlants:Zm00001d029127_T001 | SEG:seg |
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3
Coordinates
chr1:-:59251440..59254298
Molecular Weight (calculated)
24053.0 Da
IEP (calculated)
5.932
GRAVY (calculated)
0.116
Length
227 amino acids
Sequence
(BLAST)
(BLAST)
001: MRQPSSSRFT TICVFCGSSE GKRTSYHDAA IALAQELVSR GIDLVYGGGG IGLMGLVSQA VHRGGRRVVG VIPRTLMTTP ETIGETAGEV VAVADMHQRK
101: AEMARQADAF IALPGGYGTL EELLEMITWA QLGIHRKPVG LVNVDGYYDP LLAFIDQAVE HGFISPSARH IIVQAPTAQD LMAKLEEYVP YYDRVASGLN
201: WETRAVVVTD AAGAGGSGPA GISVPGI
101: AEMARQADAF IALPGGYGTL EELLEMITWA QLGIHRKPVG LVNVDGYYDP LLAFIDQAVE HGFISPSARH IIVQAPTAQD LMAKLEEYVP YYDRVASGLN
201: WETRAVVVTD AAGAGGSGPA GISVPGI
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.