Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- nucleus 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44352 | Canola | cytosol | 87.06 | 86.21 |
| CDY62895 | Canola | cytosol | 84.08 | 85.35 |
| TraesCS4D01G250300.1 | Wheat | mitochondrion | 26.37 | 77.94 |
| TraesCS4A01G054500.1 | Wheat | mitochondrion | 25.87 | 76.47 |
| Os10t0479500-01 | Rice | mitochondrion | 75.12 | 74.02 |
| AT2G28305.1 | Thale cress | cytosol | 78.11 | 73.71 |
| Zm00001d014016_P001 | Maize | mitochondrion, nucleus | 75.12 | 72.95 |
| EER94070 | Sorghum | mitochondrion | 75.12 | 72.95 |
| AT3G53450.1 | Thale cress | cytosol | 77.61 | 72.56 |
| TraesCS1D01G154700.1 | Wheat | mitochondrion | 74.63 | 72.12 |
| TraesCS1B01G173200.1 | Wheat | mitochondrion | 74.63 | 72.12 |
| TraesCS1A01G156100.1 | Wheat | mitochondrion | 74.63 | 72.12 |
| TraesCS4B01G250400.1 | Wheat | mitochondrion | 73.13 | 71.71 |
| Os03t0109300-01 | Rice | mitochondrion | 75.12 | 71.56 |
| TraesCS4A01G413200.1 | Wheat | mitochondrion | 73.13 | 71.36 |
| TraesCS4D01G310800.1 | Wheat | mitochondrion | 72.64 | 71.22 |
| TraesCS4B01G313800.1 | Wheat | mitochondrion | 72.64 | 71.22 |
| AT5G06300.1 | Thale cress | cytosol | 74.13 | 68.66 |
| AT2G37210.2 | Thale cress | cytosol | 78.61 | 66.11 |
| AT2G35990.1 | Thale cress | cytosol | 68.66 | 64.79 |
| TraesCS2D01G376900.1 | Wheat | cytosol | 77.11 | 63.01 |
| TraesCS2A01G380600.1 | Wheat | cytosol | 77.11 | 63.01 |
| Os02t0628000-00 | Rice | cytosol | 76.12 | 62.7 |
| Zm00001d029127_P001 | Maize | mitochondrion | 70.15 | 62.11 |
| TraesCS1D01G003500.1 | Wheat | cytosol | 73.63 | 61.92 |
| EES05457 | Sorghum | cytosol | 75.12 | 61.89 |
| Zm00001d003013_P001 | Maize | cytosol | 74.63 | 60.24 |
| TraesCS4D01G250200.1 | Wheat | mitochondrion | 33.83 | 60.18 |
| AT4G35190.1 | Thale cress | cytosol | 68.16 | 60.09 |
| Os04t0518800-01 | Rice | cytosol | 74.63 | 60.0 |
| EER94862 | Sorghum | mitochondrion, plastid | 64.68 | 59.36 |
| Zm00001d025868_P002 | Maize | cytosol | 74.63 | 59.29 |
| HORVU2Hr1G089620.5 | Barley | cytosol | 77.11 | 58.94 |
| AT5G11950.1 | Thale cress | cytosol | 63.18 | 58.8 |
| EES11120 | Sorghum | cytosol | 75.62 | 58.69 |
| TraesCS2B01G397600.2 | Wheat | cytosol | 76.62 | 55.0 |
| AT5G26140.2 | Thale cress | cytosol | 37.31 | 45.73 |
| HORVU4Hr1G079860.4 | Barley | cytosol, nucleus | 38.31 | 25.5 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | EntrezGene:831890 | UniProt:A0A178UQW2 | ProteinID:AED90579.2 | ArrayExpress:AT5G03270 |
| EnsemblPlantsGene:AT5G03270 | RefSeq:AT5G03270 | TAIR:AT5G03270 | RefSeq:AT5G03270-TAIR-G | EnsemblPlants:AT5G03270.1 | TAIR:AT5G03270.1 |
| ProteinID:BAB08387.1 | ProteinID:CAB86094.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:LOG | InterPro:LOG_fam | RefSeq:NP_001318465.1 | ProteinID:OAO95514.1 |
| PFAM:PF03641 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0007064 |
| PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009025 | PO:PO:0009030 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0020030 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF17 | UniProt:Q9LYV8 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI0001D340A9 | : |
Description
LOG6Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UQW2]
Coordinates
chr5:+:781725..784368
Molecular Weight (calculated)
22095.9 Da
IEP (calculated)
6.159
GRAVY (calculated)
-0.026
Length
201 amino acids
Sequence
(BLAST)
(BLAST)
001: MENEEGKREM TKKQSSRFKS ICVFCGSSNG NKASYQDAAI DLAKELVMRK IDLVYGGGSI GLMGLVSQAV HDGGRHVIGV IPKLLMLQEL TGETVGEVKE
101: VADMHQRKAV MAKHSDAFIT LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVDGYYDALL LFIDKAVEEG FILPTARHII VSAPTARELF IKLEEYVPQH
201: K
101: VADMHQRKAV MAKHSDAFIT LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVDGYYDALL LFIDKAVEEG FILPTARHII VSAPTARELF IKLEEYVPQH
201: K
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.