Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY44352 | Canola | cytosol | 62.76 | 73.89 |
| AT5G03270.1 | Thale cress | cytosol | 61.92 | 73.63 |
| GSMUA_Achr6P36490_001 | Banana | cytosol | 66.53 | 73.27 |
| CDY62895 | Canola | cytosol | 60.67 | 73.23 |
| KRH22873 | Soybean | cytosol | 64.02 | 73.21 |
| Bra017202.1-P | Field mustard | cytosol | 64.02 | 72.86 |
| KRH26448 | Soybean | cytosol | 63.6 | 72.73 |
| Solyc06g075090.2.1 | Tomato | cytosol | 57.74 | 72.25 |
| VIT_06s0004g02680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 64.02 | 72.17 |
| PGSC0003DMT400055525 | Potato | cytosol | 65.69 | 72.02 |
| Solyc09g007830.2.1 | Tomato | cytosol | 65.69 | 72.02 |
| Bra023107.1-P | Field mustard | cytosol | 61.92 | 71.84 |
| Bra003135.1-P | Field mustard | cytosol | 49.79 | 71.26 |
| GSMUA_Achr1P09040_001 | Banana | cytosol | 64.85 | 71.1 |
| Solyc10g084150.1.1 | Tomato | cytosol | 64.85 | 70.45 |
| TraesCS1D01G154700.1 | Wheat | mitochondrion | 61.09 | 70.19 |
| VIT_08s0040g01780.t01 | Wine grape | cytosol | 64.02 | 70.18 |
| PGSC0003DMT400027157 | Potato | cytosol | 64.44 | 70.0 |
| Bra034399.1-P | Field mustard | cytosol | 62.34 | 69.95 |
| Bra011962.1-P | Field mustard | cytosol | 62.34 | 69.95 |
| KRH15578 | Soybean | cytosol | 22.18 | 69.74 |
| KRH29895 | Soybean | cytosol | 64.02 | 69.55 |
| Bra039788.1-P | Field mustard | cytosol | 48.54 | 69.46 |
| Bra007000.1-P | Field mustard | cytosol | 48.54 | 69.05 |
| KRG95991 | Soybean | cytosol | 63.18 | 68.95 |
| KRH19875 | Soybean | cytosol | 62.76 | 68.49 |
| KRH67693 | Soybean | cytosol | 62.76 | 68.49 |
| TraesCS4D01G250300.1 | Wheat | mitochondrion | 19.25 | 67.65 |
| TraesCS2D01G376900.1 | Wheat | cytosol | 69.46 | 67.48 |
| PGSC0003DMT400020890 | Potato | cytosol | 62.34 | 65.35 |
| KRH25030 | Soybean | cytosol | 63.6 | 65.24 |
| KRH15614 | Soybean | cytosol, extracellular, plastid | 18.83 | 65.22 |
| Zm00001d003013_P001 | Maize | cytosol | 67.78 | 65.06 |
| Solyc11g069570.1.1 | Tomato | cytosol | 63.6 | 64.96 |
| TraesCS4D01G310800.1 | Wheat | mitochondrion | 55.65 | 64.88 |
| Os04t0518800-01 | Rice | cytosol | 67.36 | 64.4 |
| KRH07771 | Soybean | cytosol | 19.67 | 64.38 |
| EES11120 | Sorghum | cytosol | 69.04 | 63.71 |
| Zm00001d025868_P002 | Maize | cytosol | 66.95 | 63.24 |
| HORVU2Hr1G089620.5 | Barley | cytosol | 69.46 | 63.12 |
| TraesCS5D01G568400.1 | Wheat | plastid | 58.16 | 59.15 |
| KRH32483 | Soybean | cytosol, golgi, mitochondrion | 42.68 | 56.35 |
| TraesCS3D01G213900.1 | Wheat | cytosol | 56.49 | 56.02 |
| TraesCS4D01G033800.1 | Wheat | cytosol | 52.3 | 55.56 |
| TraesCS1D01G367400.1 | Wheat | cytosol | 49.79 | 55.35 |
| TraesCS3D01G251900.1 | Wheat | cytosol | 51.46 | 54.42 |
| TraesCS5D01G568500.1 | Wheat | cytosol | 56.07 | 54.03 |
| TraesCS4D01G250200.1 | Wheat | mitochondrion | 25.52 | 53.98 |
| TraesCS5D01G353600.1 | Wheat | cytosol | 55.65 | 53.41 |
| TraesCS1D01G444500.1 | Wheat | cytosol | 56.07 | 49.08 |
Protein Annotations
| EnsemblPlants:TraesCS1D01G003500.1 | EnsemblPlantsGene:TraesCS1D01G003500 | Gene3D:3.40.50.450 | InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF28 | PFAM:PF03641 | SEG:seg | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | MapMan:11.4.1.2 |
Description
No Description!
Coordinates
chr1D:+:1248513..1257201
Molecular Weight (calculated)
26039.3 Da
IEP (calculated)
5.725
GRAVY (calculated)
-0.380
Length
239 amino acids
Sequence
(BLAST)
(BLAST)
001: MAREEEMEIK KKEEAGGQGK AQSRFRRICV FCGSSKGNKK SYQDAAVELG KELVARNIDL VYGGGSLGLM GLVSQAVHSR GRQVTGMIPT TLMPREIIGE
101: TAGEVKEVAD MHQRKAEMGR QSDAFIALPG GYGTLEELLE VITWAQLRIH DKPVGLLNVD GYYNALLSFI DKAMEEGLIA PTARHIIVLG TTASELLDKL
201: QEYSPRHGEM KGEVEQLSSR KNCDMDGLKE GSSQGPDAA
101: TAGEVKEVAD MHQRKAEMGR QSDAFIALPG GYGTLEELLE VITWAQLRIH DKPVGLLNVD GYYNALLSFI DKAMEEGLIA PTARHIIVLG TTASELLDKL
201: QEYSPRHGEM KGEVEQLSSR KNCDMDGLKE GSSQGPDAA
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.