Factsheet for Bra011962.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY04551	Canola	cytosol	100.0	100.0
Bra034399.1-P	Field mustard	cytosol	96.24	96.24
AT2G28305.1	Thale cress	cytosol	93.43	93.43
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	84.98	85.38
KRH22873	Soybean	cytosol	82.16	83.73
KRH26448	Soybean	cytosol	81.69	83.25
KRH29895	Soybean	cytosol	84.98	82.27
Bra023107.1-P	Field mustard	cytosol	78.87	81.55
Bra017202.1-P	Field mustard	cytosol	79.81	80.95
Solyc06g075090.2.1	Tomato	cytosol	71.83	80.1
Bra003135.1-P	Field mustard	cytosol	61.5	78.44
KRH25030	Soybean	cytosol	85.45	78.11
Bra039788.1-P	Field mustard	cytosol	60.56	77.25
Zm00001d014016_P001	Maize	mitochondrion, nucleus	74.65	76.81
Bra007000.1-P	Field mustard	cytosol	60.56	76.79
EER94070	Sorghum	mitochondrion	74.18	76.33
TraesCS1D01G154700.1	Wheat	mitochondrion	73.24	75.0
TraesCS1B01G173200.1	Wheat	mitochondrion	73.24	75.0
TraesCS1A01G156100.1	Wheat	mitochondrion	73.24	75.0
TraesCS4A01G413200.1	Wheat	mitochondrion	71.36	73.79
TraesCS4D01G310800.1	Wheat	mitochondrion	70.89	73.66
TraesCS4B01G250400.1	Wheat	mitochondrion	70.89	73.66
TraesCS4D01G250300.1	Wheat	mitochondrion	23.47	73.53
PGSC0003DMT400020890	Potato	cytosol	78.4	73.25
TraesCS4B01G313800.1	Wheat	mitochondrion	70.42	73.17
TraesCS4A01G054500.1	Wheat	mitochondrion	23.0	72.06
Solyc11g069570.1.1	Tomato	cytosol	78.87	71.79
Bra009182.1-P	Field mustard	cytosol	72.3	71.63
KRH32483	Soybean	cytosol, golgi, mitochondrion	58.22	68.51
Zm00001d003013_P001	Maize	cytosol	78.4	67.07
TraesCS2D01G376900.1	Wheat	cytosol	77.0	66.67
TraesCS2A01G380600.1	Wheat	cytosol	76.53	66.26
EES05457	Sorghum	cytosol	75.59	65.98
EES11120	Sorghum	cytosol	79.81	65.64
Bra017270.1-P	Field mustard	cytosol	64.32	64.32
Bra020803.1-P	Field mustard	cytosol	68.54	64.04
Zm00001d029127_P001	Maize	mitochondrion	68.08	63.88
Bra008924.1-P	Field mustard	cytosol	64.32	63.43
Bra011592.1-P	Field mustard	cytosol	69.48	63.25
Zm00001d025868_P002	Maize	cytosol	75.12	63.24
Bra023351.1-P	Field mustard	cytosol	64.32	63.13
TraesCS4D01G250200.1	Wheat	mitochondrion	33.33	62.83
EER94862	Sorghum	mitochondrion, plastid	64.32	62.56
TraesCS1D01G003500.1	Wheat	cytosol	69.95	62.34
HORVU2Hr1G089620.5	Barley	cytosol	76.53	61.98
Bra036562.1-P	Field mustard	cytosol	54.93	60.94
TraesCS2B01G397600.2	Wheat	cytosol	76.53	58.21
Bra028736.1-P	Field mustard	nucleus	50.7	42.02
Bra028735.1-P	Field mustard	cytosol	20.19	34.13
Os03t0697200-00	Rice	nucleus	37.56	32.92
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	38.03	26.82

Protein Annotations

EnsemblPlants:Bra011962.1	EnsemblPlants:Bra011962.1-P	EnsemblPlantsGene:Bra011962	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF39	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00025419B2	UniProt:M4D654	MapMan:11.4.1.2	:

Description

AT2G28305 (E=2e-105) | unknown protein

Coordinates

chrA07:+:10928598..10932121

Molecular Weight (calculated)

23189.1 Da

IEP (calculated)

6.515

GRAVY (calculated)

-0.086

Length

213 amino acids

Sequence
(BLAST)

001: MEVEPKFKRI CVFCGSSAGN KTSYRDAAIE LGAELVSKNI DLVYGGGSIG LMGLISQAVY NGGRHVIGVI PKTLMPKEIT GETVGEVKAV ADMHERKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ITPTARHIIV SAPSAKDLVK KLEEYVPRHE KVASKKSWEM
201: EQIGQSPTCQ ISR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.