Factsheet for Bra023107.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY46763	Canola	cytosol	100.0	100.0
Bra017202.1-P	Field mustard	cytosol	95.63	93.81
Bra003135.1-P	Field mustard	cytosol	69.9	86.23
Bra039788.1-P	Field mustard	cytosol	68.45	84.43
Bra007000.1-P	Field mustard	cytosol	68.45	83.93
Solyc09g007830.2.1	Tomato	cytosol	87.86	83.03
PGSC0003DMT400055525	Potato	cytosol	87.86	83.03
Solyc10g084150.1.1	Tomato	cytosol	87.86	82.27
VIT_08s0040g01780.t01	Wine grape	cytosol	86.89	82.11
PGSC0003DMT400027157	Potato	cytosol	87.38	81.82
KRG95991	Soybean	cytosol	86.41	81.28
KRH19875	Soybean	cytosol	85.92	80.82
AT2G37210.2	Thale cress	cytosol	93.69	80.75
KRH67693	Soybean	cytosol	85.44	80.37
Bra034399.1-P	Field mustard	cytosol	82.52	79.81
TraesCS4D01G250300.1	Wheat	mitochondrion	26.21	79.41
Bra011962.1-P	Field mustard	cytosol	81.55	78.87
GSMUA_Achr6P36490_001	Banana	cytosol	83.01	78.8
Zm00001d014016_P001	Maize	mitochondrion, nucleus	79.13	78.74
EER94070	Sorghum	mitochondrion	78.64	78.26
TraesCS4A01G054500.1	Wheat	mitochondrion	25.73	77.94
GSMUA_Achr1P09040_001	Banana	cytosol	82.04	77.52
TraesCS1B01G173200.1	Wheat	mitochondrion	78.16	77.4
TraesCS1A01G156100.1	Wheat	mitochondrion	78.16	77.4
TraesCS1D01G154700.1	Wheat	mitochondrion	78.16	77.4
Bra009182.1-P	Field mustard	cytosol	78.64	75.35
TraesCS4A01G413200.1	Wheat	mitochondrion	74.76	74.76
TraesCS4D01G310800.1	Wheat	mitochondrion	74.27	74.63
TraesCS4B01G250400.1	Wheat	mitochondrion	73.3	73.66
TraesCS4B01G313800.1	Wheat	mitochondrion	73.3	73.66
Bra017270.1-P	Field mustard	cytosol	67.96	65.73
EES05457	Sorghum	cytosol	77.18	65.16
Zm00001d003013_P001	Maize	cytosol	78.64	65.06
TraesCS2A01G380600.1	Wheat	cytosol	77.67	65.04
TraesCS2D01G376900.1	Wheat	cytosol	76.7	64.23
Bra011592.1-P	Field mustard	cytosol	72.33	63.68
EES11120	Sorghum	cytosol	79.61	63.32
Zm00001d025868_P002	Maize	cytosol	77.67	63.24
Zm00001d029127_P001	Maize	mitochondrion	69.42	63.0
Bra020803.1-P	Field mustard	cytosol	69.42	62.72
HORVU2Hr1G089620.5	Barley	cytosol	79.61	62.36
TraesCS1D01G003500.1	Wheat	cytosol	71.84	61.92
TraesCS4D01G250200.1	Wheat	mitochondrion	33.5	61.06
EER94862	Sorghum	mitochondrion, plastid	64.08	60.27
Bra023351.1-P	Field mustard	cytosol	63.11	59.91
Bra008924.1-P	Field mustard	cytosol	62.62	59.72
TraesCS2B01G397600.2	Wheat	cytosol	78.16	57.5
Bra036562.1-P	Field mustard	cytosol	52.91	56.77
Bra028736.1-P	Field mustard	nucleus	54.37	43.58
Bra028735.1-P	Field mustard	cytosol	22.33	36.51
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	39.32	26.82

Protein Annotations

EnsemblPlants:Bra023107.1	EnsemblPlants:Bra023107.1-P	EnsemblPlantsGene:Bra023107	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17	PFAM:PF03641	SUPFAM:SSF102405
TIGRFAMs:TIGR00730	UniParc:UPI000253FF93	UniProt:M4E2V6	MapMan:11.4.1.2	:	:

Description

AT2G37210 (E=3e-110) | Encodes a protein of unknown function. It has been crystallized and shown to be structurally almost identical to the protein encoded by At5g11950.

Coordinates

chrA03:-:8719224..8721727

Molecular Weight (calculated)

22412.2 Da

IEP (calculated)

6.244

GRAVY (calculated)

-0.073

Length

206 amino acids

Sequence
(BLAST)

001: MEIKAETMQK SKFKRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGVIPKTL MPKELTGETV GEVRAVTGMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHEK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPN AKELVKKLEE YAPCHESVTS
201: KLCWEM

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.