CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 8
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d014016_P001	Maize	mitochondrion, nucleus	97.58	97.58
Os10t0479500-01	Rice	mitochondrion	94.69	96.08
TraesCS1D01G154700.1	Wheat	mitochondrion	92.27	91.83
TraesCS1B01G173200.1	Wheat	mitochondrion	92.27	91.83
TraesCS1A01G156100.1	Wheat	mitochondrion	92.27	91.83
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	82.13	80.19
Bra023107.1-P	Field mustard	cytosol	78.26	78.64
Bra017202.1-P	Field mustard	cytosol	79.71	78.57
Solyc09g007830.2.1	Tomato	cytosol	81.64	77.52
PGSC0003DMT400055525	Potato	cytosol	81.64	77.52
GSMUA_Achr6P36490_001	Banana	cytosol	81.16	77.42
CDY44352	Canola	cytosol	75.85	77.34
Bra003135.1-P	Field mustard	cytosol	62.32	77.25
GSMUA_Achr1P09040_001	Banana	cytosol	80.68	76.61
Solyc06g075090.2.1	Tomato	cytosol	70.53	76.44
CDY62895	Canola	cytosol	72.95	76.26
Bra039788.1-P	Field mustard	cytosol	60.87	75.45
VIT_08s0040g01780.t01	Wine grape	cytosol	79.23	75.23
AT5G03270.1	Thale cress	cytosol	72.95	75.12
KRH22873	Soybean	cytosol	75.85	75.12
Solyc10g084150.1.1	Tomato	cytosol	79.71	75.0
KRH29895	Soybean	cytosol	79.71	75.0
KRH26448	Soybean	cytosol	75.36	74.64
PGSC0003DMT400027157	Potato	cytosol	79.23	74.55
Bra007000.1-P	Field mustard	cytosol	60.39	74.4
Bra011962.1-P	Field mustard	cytosol	76.33	74.18
Bra034399.1-P	Field mustard	cytosol	76.33	74.18
KRH15578	Soybean	cytosol	27.05	73.68
KRH67693	Soybean	cytosol	77.78	73.52
KRG95991	Soybean	cytosol	77.78	73.52
KRH19875	Soybean	cytosol	77.78	73.52
KRH25030	Soybean	cytosol	79.71	70.82
KRH07771	Soybean	cytosol	24.64	69.86
PGSC0003DMT400020890	Potato	cytosol	75.85	68.86
Solyc11g069570.1.1	Tomato	cytosol	77.29	68.38
KRH15614	Soybean	cytosol, extracellular, plastid	22.71	68.12
EER94862	Sorghum	mitochondrion, plastid	71.01	67.12
EES05457	Sorghum	cytosol	77.78	65.98
EER97131	Sorghum	cytosol	71.98	63.4
OQU88832	Sorghum	cytosol, plastid	69.08	62.72
EES11120	Sorghum	cytosol	77.78	62.16
KRH32483	Soybean	cytosol, golgi, mitochondrion	52.17	59.67
EES03190	Sorghum	cytosol	70.53	58.17
EES18588	Sorghum	cytosol	64.73	58.01
EER93620	Sorghum	cytosol	60.87	54.31
KXG22670	Sorghum	plastid	66.67	53.08
OQU87402	Sorghum	plastid	65.22	51.33
EER93059	Sorghum	cytosol	43.0	48.9

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8067410	UniProt:C5WYD9	EnsemblPlants:EER94070	ProteinID:EER94070
ProteinID:EER94070.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF17
EnsemblPlantsGene:SORBI_3001G217700	SUPFAM:SSF102405	unigene:Sbi.1854	TIGRFAMs:TIGR00730	UniParc:UPI0001A828C9	RefSeq:XP_002467072.1

Description

hypothetical protein

Coordinates

chr1:-:20251661..20256323

Molecular Weight (calculated)

22881.6 Da

IEP (calculated)

6.155

GRAVY (calculated)

-0.118

Length

207 amino acids

Sequence
(BLAST)

001: MTMRQSRFKR ICVFCGSSQG KKRSYHDAAI ELGNELVARS VDLVYGGGSI GLMGLVSQAV YDGGRHVIGV IPKTLMTPEI SGETVGEVRP VADMHQRKAE
101: MARQSDAFIA LPGGYGTLEE LLEVITWAQL GIHHKPVGLL NVDGYYNSLL TFIDKAVEEG FINPSARRII VLAPTAQELM DKLEEYEPYH DRVASTLNWE
201: MGHQLGY

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.