CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033605_P001	Maize	cytosol	91.38	89.08
TraesCS4A01G277200.1	Wheat	cytosol	78.02	81.53
TraesCS4D01G033800.1	Wheat	cytosol	78.45	80.89
TraesCS4B01G035700.1	Wheat	cytosol	78.02	80.09
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	59.91	70.56
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	58.62	68.69
GSMUA_Achr8P31460_001	Banana	cytosol	58.19	63.98
KRH32950	Soybean	cytosol	56.03	63.41
VIT_13s0064g00740.t01	Wine grape	cytosol	58.19	62.79
EER94070	Sorghum	mitochondrion	54.31	60.87
KRH39935	Soybean	cytosol	58.19	60.54
HORVU4Hr1G005660.7	Barley	nucleus	54.74	57.47
GSMUA_Achr4P03590_001	Banana	plastid	60.78	57.09
VIT_08s0007g08340.t01	Wine grape	cytosol	53.88	56.31
EES18588	Sorghum	cytosol	53.88	54.11
EER94862	Sorghum	mitochondrion, plastid	50.43	53.42
EES05457	Sorghum	cytosol	55.17	52.46
EER97131	Sorghum	cytosol	52.59	51.91
OQU88832	Sorghum	cytosol, plastid	49.14	50.0
EES11120	Sorghum	cytosol	55.6	49.81
EER93059	Sorghum	cytosol	38.79	49.45
EES03190	Sorghum	cytosol	53.45	49.4
OQU87402	Sorghum	plastid	55.17	48.67
KXG22670	Sorghum	plastid	52.59	46.92

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8054124	UniProt:C5WNW4	EnsemblPlants:EER93620	ProteinID:EER93620
ProteinID:EER93620.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF25
EnsemblPlantsGene:SORBI_3001G127700	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001A8291D	RefSeq:XP_002466622.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:10040307..10042393

Molecular Weight (calculated)

24520.3 Da

IEP (calculated)

4.706

GRAVY (calculated)

-0.134

Length

232 amino acids

Sequence
(BLAST)

001: MEENQAEKLA PESSGGPVRT ICVFCGSRPG NRPSFSAAAL DLGKQLVERQ INLVYGGGSG GLMGLVSKAV YEGGRHVLGV IPTALLPEEV SGETLGEVKV
101: VRDMHERKAE MAKHADAFIA LPGGYGTIEE LLEIIAWAQL GIHSKPVGLL NVDGYYNSLL SLFDKGVEEG FIDPKARNIF VLADTAAELL TKLTMARLTV
201: AADEDDGTTP GPGGDEDEEK GAAAGVKRKR TT

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.