CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plastid 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d038862_P001	Maize	cytosol, extracellular	89.61	87.71
Os05t0541200-01	Rice	cytosol, plasma membrane	79.65	82.51
TraesCS1D01G367400.1	Wheat	cytosol	74.46	80.0
TraesCS1A01G362500.1	Wheat	cytosol	74.03	79.53
TraesCS1B01G379700.1	Wheat	cytosol	72.29	77.67
GSMUA_Achr3P25920_001	Banana	cytosol	64.94	70.09
AT5G11950.1	Thale cress	cytosol	62.34	66.67
Solyc08g062820.2.1	Tomato	cytosol	61.47	66.67
Bra023351.1-P	Field mustard	cytosol	62.34	66.36
PGSC0003DMT400021223	Potato	cytosol	61.04	66.2
VIT_04s0008g01040.t01	Wine grape	cytosol	61.9	65.9
CDX69717	Canola	cytosol	61.04	65.28
CDX97157	Canola	cytosol	61.04	65.28
Bra008924.1-P	Field mustard	cytosol	61.04	65.28
KRH52208	Soybean	cytosol	60.17	65.26
CDY65870	Canola	cytosol	61.47	64.84
EER94070	Sorghum	mitochondrion	58.01	64.73
OQU87402	Sorghum	plastid	73.59	64.64
CDX91185	Canola	cytosol	61.47	63.39
KRH05430	Soybean	cytosol	58.44	62.5
CDY19786	Canola	cytosol	51.52	62.3
CDX87066	Canola	cytosol	51.52	62.3
KRH61527	Soybean	cytosol	60.61	62.22
Bra036562.1-P	Field mustard	cytosol	51.08	61.46
GSMUA_Achr2P08480_001	Banana	mitochondrion	65.8	60.08
HORVU1Hr1G079570.13	Barley	plastid	68.4	55.63
EES05457	Sorghum	cytosol	58.01	54.92
EER94862	Sorghum	mitochondrion, plastid	51.95	54.79
EER97131	Sorghum	cytosol	55.41	54.47
EER93620	Sorghum	cytosol	54.11	53.88
OQU88832	Sorghum	cytosol, plastid	51.95	52.63
EES11120	Sorghum	cytosol	58.87	52.51
CDY48150	Canola	mitochondrion	27.27	52.5
EES03190	Sorghum	cytosol	55.84	51.39
AT5G26140.2	Thale cress	cytosol	34.63	48.78
EER93059	Sorghum	cytosol	36.8	46.7
KXG22670	Sorghum	plastid	52.38	46.54

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:8061078	UniProt:C5YUV1	EnsemblPlants:EES18588	ProteinID:EES18588
ProteinID:EES18588.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF16
EnsemblPlantsGene:SORBI_3009G214600	SUPFAM:SSF102405	unigene:Sbi.8520	TIGRFAMs:TIGR00730	UniParc:UPI0001A88CD7	RefSeq:XP_002440158.1
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr9:+:55959390..55962236

Molecular Weight (calculated)

24349.2 Da

IEP (calculated)

4.559

GRAVY (calculated)

0.045

Length

231 amino acids

Sequence
(BLAST)

001: MGDGAAAAVP SRFRTICVFC GSNAGRRKVY ADAALELGHE LVRRGISLVY GGGSIGLMGV IARTVGDGGC HVLGVIPKAL MPIEISGESV GEVKVVDDMH
101: QRKAEMARQS EAFIALPGGY GTMEELLEMI TWCQLGIHDK PVGLLNVDGY YDPLLALFEK GATEGFINPD CSQIFVSAPT ASELLTKMEQ YTRLHQEVAP
201: ATSWEISELG YGRAAADGGG GGAPSSEEEG L

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.