Factsheet for Bra023351.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65870	Canola	cytosol	98.62	97.72
AT5G11950.1	Thale cress	cytosol	95.85	96.3
Bra008924.1-P	Field mustard	cytosol	92.63	93.06
CDX91185	Canola	cytosol	95.85	92.86
Bra036562.1-P	Field mustard	cytosol	73.73	83.33
KRH52208	Soybean	cytosol	78.34	79.81
Solyc08g062820.2.1	Tomato	cytosol	77.88	79.34
PGSC0003DMT400021223	Potato	cytosol	76.96	78.4
VIT_04s0008g01040.t01	Wine grape	cytosol	78.34	78.34
KRH05430	Soybean	cytosol	75.58	75.93
KRH61527	Soybean	cytosol	77.42	74.67
GSMUA_Achr3P25920_001	Banana	cytosol	70.51	71.5
TraesCS1B01G379700.1	Wheat	cytosol	64.98	65.58
TraesCS1A01G362500.1	Wheat	cytosol	64.98	65.58
Bra017202.1-P	Field mustard	cytosol	63.13	65.24
TraesCS1D01G367400.1	Wheat	cytosol	64.06	64.65
Bra034399.1-P	Field mustard	cytosol	63.13	64.32
Bra011962.1-P	Field mustard	cytosol	63.13	64.32
Os01t0708500-01	Rice	mitochondrion	65.9	64.13
Bra023107.1-P	Field mustard	cytosol	59.91	63.11
TraesCS3D01G251900.1	Wheat	cytosol	65.44	62.83
Bra009182.1-P	Field mustard	cytosol	62.21	62.79
Os05t0541200-01	Rice	cytosol, plasma membrane	64.52	62.78
TraesCS3A01G251500.1	Wheat	plastid	65.9	62.45
TraesCS3B01G281000.1	Wheat	cytosol	64.98	62.39
EES18588	Sorghum	cytosol	66.36	62.34
Zm00001d043692_P001	Maize	cytosol	66.36	60.5
Bra003135.1-P	Field mustard	cytosol	46.54	60.48
Zm00001d038862_P001	Maize	cytosol, extracellular	65.44	60.17
Bra039788.1-P	Field mustard	cytosol	46.08	59.88
GSMUA_Achr2P08480_001	Banana	mitochondrion	69.59	59.68
Bra007000.1-P	Field mustard	cytosol	46.08	59.52
Bra017270.1-P	Field mustard	cytosol	58.06	59.15
OQU87402	Sorghum	plastid	66.82	55.13
Bra020803.1-P	Field mustard	cytosol	57.6	54.82
Bra011592.1-P	Field mustard	cytosol	58.99	54.7
HORVU1Hr1G079570.13	Barley	plastid	60.37	46.13
HORVU3Hr1G066810.9	Barley	mitochondrion	55.3	43.01
Bra028736.1-P	Field mustard	nucleus	43.32	36.58
Bra028735.1-P	Field mustard	cytosol	17.51	30.16

Protein Annotations

EnsemblPlants:Bra023351.1	EnsemblPlants:Bra023351.1-P	EnsemblPlantsGene:Bra023351	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00025433A7	UniProt:M4E3J9	MapMan:11.4.1.2	:

Description

AT5G11950 (E=2e-108) | protein homodimerization

Coordinates

chrA02:+:2970382..2971771

Molecular Weight (calculated)

23877.8 Da

IEP (calculated)

6.096

GRAVY (calculated)

-0.180

Length

217 amino acids

Sequence
(BLAST)

001: MEDDKQRSRF RKICVFCGSH SGHREVFSDA AIELGNELVK RKIDLVYGGG SVGLMGLISR RVYEGGFHVL GIIPKALMPI EISGETVGDV RVVADMHERK
101: AAMAQEAEAF IALPGGYGTM EELLEMITWS QLGIHKKTVG LLNVDGYYNS LLALFDTGVE EGFIKPGARN IVVSAPTAKE LMEKMEEYTP SHKHVAAHES
201: WKVEELGAYP GQQSKPQ

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.