Factsheet for Os01t0708500-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
nucleus 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
cytosol 1
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G251900.1	Wheat	cytosol	88.34	87.17
TraesCS3B01G281000.1	Wheat	cytosol	87.89	86.73
TraesCS3A01G251500.1	Wheat	plastid	88.34	86.03
Zm00001d043692_P001	Maize	cytosol	84.75	79.41
Os05t0541200-01	Rice	cytosol, plasma membrane	78.92	78.92
OQU87402	Sorghum	plastid	86.55	73.38
GSMUA_Achr3P25920_001	Banana	cytosol	69.96	72.9
Solyc08g062820.2.1	Tomato	cytosol	67.71	70.89
VIT_04s0008g01040.t01	Wine grape	cytosol	68.61	70.51
PGSC0003DMT400021223	Potato	cytosol	67.26	70.42
KRH52208	Soybean	cytosol	66.37	69.48
KRH05430	Soybean	cytosol	65.02	67.13
AT5G11950.1	Thale cress	cytosol	64.57	66.67
KRH61527	Soybean	cytosol	66.82	66.22
CDX69717	Canola	cytosol	64.13	66.2
Bra008924.1-P	Field mustard	cytosol	64.13	66.2
CDX97157	Canola	cytosol	64.13	66.2
Os10t0479500-01	Rice	mitochondrion	60.54	66.18
Bra023351.1-P	Field mustard	cytosol	64.13	65.9
CDY65870	Canola	cytosol	63.23	64.38
CDY19786	Canola	cytosol	54.26	63.35
CDX87066	Canola	cytosol	54.26	63.35
GSMUA_Achr2P08480_001	Banana	mitochondrion	71.75	63.24
Bra036562.1-P	Field mustard	cytosol	54.26	63.02
CDX91185	Canola	cytosol	63.23	62.95
Os03t0109300-01	Rice	mitochondrion	59.19	62.56
HORVU3Hr1G066810.9	Barley	mitochondrion	76.23	60.93
CDY48150	Canola	mitochondrion	30.04	55.83
Os02t0628000-00	Rice	cytosol	60.09	54.92
Os01t0588900-01	Rice	cytosol	58.74	54.13
Os04t0518800-01	Rice	cytosol	60.09	53.6
AT5G26140.2	Thale cress	cytosol	38.56	52.44
Os09t0547500-01	Rice	cytosol, plastid	52.47	51.54
Os03t0857900-02	Rice	nucleus	56.05	50.81
Os05t0591600-01	Rice	cytosol	55.61	46.62
Os03t0697200-00	Rice	nucleus	36.32	33.33

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:4327684	EMBL:AK061091	EMBL:AK099170	ProteinID:BAB92347.1
ProteinID:BAF05941.1	ProteinID:BAS73957.1	ProteinID:EAZ13277.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	EnsemblPlantsGene:Os01g0708500
EnsemblPlants:Os01t0708500-01	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF4	UniProt:Q8LR50	SUPFAM:SSF102405
TIGRFAMs:TIGR00730	UniParc:UPI00000A99AC	RefSeq:XP_015611657.1	SEG:seg	:	:

Description

LONELY GUY LIKE PHOSPHORIBOHYDROLASE 1Similar to lysine decarboxylase-like protein. (Os01t0708500-01);Similar to lysine decarboxylase-like protein. (Os01t0708500-02);Similar to lysine decarboxylase-like protein. (Os01t0708500-03)

Coordinates

chr1:-:29437301..29439863

Molecular Weight (calculated)

23620.5 Da

IEP (calculated)

4.791

GRAVY (calculated)

0.034

Length

223 amino acids

Sequence
(BLAST)

001: MGDNSAAAAA VAAPRGRFGR ICVFCGSNAG NRAVFGDAAL QLGQELVSRG IELVYGGGSV GLMGLIAQTV LDGGCGVLGV IPKALMPTEI SGASVGEVKI
101: VSDMHERKAE MARQSDAFIA LPGGYGTMEE LLEMITWSQL GIHDKPVGLL NVDGYYDPLL ALFDKGAAEG FIKADCRQII VSAPTAHELL RKMEQYTRSH
201: QEVAPRTSWE MSELGYGKTP EES

Best Arabidopsis Sequence Match ( AT5G11950.1 )
(BLAST)

001: MEDNQRSRFR KICVFCGSHS GHREVFSDAA IELGNELVKR KIDLVYGGGS VGLMGLISRR VYEGGLHVLG IIPKALMPIE ISGETVGDVR VVADMHERKA
101: AMAQEAEAFI ALPGGYGTME ELLEMITWSQ LGIHKKTVGL LNVDGYYNNL LALFDTGVEE GFIKPGARNI VVSAPTAKEL MEKMEEYTPS HMHVASHESW
201: KVEELGDYPG QENKPQ

Arabidopsis Description

LOG8Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UJ28]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.