Factsheet for Os04t0518800-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d003013_P001	Maize	cytosol	83.6	83.94
EES11120	Sorghum	cytosol	86.8	83.78
Os02t0628000-00	Rice	cytosol	80.4	82.38
Os10t0479500-01	Rice	mitochondrion	65.2	79.9
TraesCS2A01G380600.1	Wheat	cytosol	78.4	79.67
TraesCS2D01G376900.1	Wheat	cytosol	78.0	79.27
CDY44352	Canola	cytosol	62.8	77.34
CDY62895	Canola	cytosol	61.2	77.27
Os03t0109300-01	Rice	mitochondrion	63.2	74.88
AT5G03270.1	Thale cress	cytosol	60.0	74.63
HORVU2Hr1G089620.5	Barley	cytosol	78.0	74.14
TraesCS2B01G397600.2	Wheat	cytosol	79.6	71.07
Zm00001d025868_P002	Maize	cytosol	71.6	70.75
TraesCS1D01G003500.1	Wheat	cytosol	64.4	67.36
Os09t0547500-01	Rice	cytosol, plastid	55.6	61.23
Os01t0588900-01	Rice	cytosol	59.2	61.16
Os01t0708500-01	Rice	mitochondrion	53.6	60.09
Os03t0857900-02	Rice	nucleus	58.8	59.76
Os05t0541200-01	Rice	cytosol, plasma membrane	50.4	56.5
Os05t0591600-01	Rice	cytosol	60.0	56.39
Os03t0697200-00	Rice	nucleus	33.2	34.16

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:4336417	ProteinID:BAF15242.1	ProteinID:BAS90109.1	ProteinID:CAE05626.1
ProteinID:EEE61351.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987
GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	EnsemblPlantsGene:Os04g0518800	EnsemblPlants:Os04t0518800-01	PFAM:PF03641
PANTHER:PTHR31223	PANTHER:PTHR31223:SF28	UniProt:Q0JBP5	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0000DD919A
RefSeq:XP_015634464.1	SEG:seg	:	:	:	:

Description

LONG AND BARBED AWN 1Cytokinin synthesis enzyme, Cytokinin-activating enzyme, Regulation of awn length and grain production (Os04t0518800-01)

Coordinates

chr4:+:25959399..25963504

Molecular Weight (calculated)

27495.5 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.126

Length

250 amino acids

Sequence
(BLAST)

001: MMDTDHTEII KEGEAVVEAM ALLQSRFRRI CVFCGSSQGK KKSYQDAAVE LGKELVARNI DLVYGGGSVG LMGLVSQAVY NGGRHVIGVI PKTLMPREIT
101: GETVGEVKAV ADMHQRKAEM ARQSDAFIAL PGGYGTLEEL LEVIAWAQLG IHDKPVGLLN VDGYYNSLLS FIDKAVEEEF ISPSARHIIV LAPTPKELLE
201: KLEAYSPRHD KVVPKMQWEM EKMSYCKSCE IPGLKEGNKA TIQAQRGSML

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.