Factsheet for Os05t0541200-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plasma membrane

Predictor Summary:

nucleus 2
plastid 2
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

plasma membrane: 27800704

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G367400.1	Wheat	cytosol	83.41	86.51
TraesCS1A01G362500.1	Wheat	cytosol	82.96	86.05
TraesCS1B01G379700.1	Wheat	cytosol	81.17	84.19
EES18588	Sorghum	cytosol	82.51	79.65
Os01t0708500-01	Rice	mitochondrion	78.92	78.92
Zm00001d038862_P001	Maize	cytosol, extracellular	81.61	77.12
GSMUA_Achr3P25920_001	Banana	cytosol	67.26	70.09
Os10t0479500-01	Rice	mitochondrion	59.64	65.2
VIT_04s0008g01040.t01	Wine grape	cytosol	63.23	64.98
AT5G11950.1	Thale cress	cytosol	62.78	64.81
Solyc08g062820.2.1	Tomato	cytosol	61.88	64.79
KRH52208	Soybean	cytosol	61.88	64.79
Bra023351.1-P	Field mustard	cytosol	62.78	64.52
PGSC0003DMT400021223	Potato	cytosol	61.44	64.32
CDX69717	Canola	cytosol	61.88	63.89
CDX97157	Canola	cytosol	61.88	63.89
Bra008924.1-P	Field mustard	cytosol	61.88	63.89
CDY65870	Canola	cytosol	61.88	63.01
KRH05430	Soybean	cytosol	60.09	62.04
KRH61527	Soybean	cytosol	62.33	61.78
CDX91185	Canola	cytosol	61.88	61.61
Os03t0109300-01	Rice	mitochondrion	57.85	61.14
CDY19786	Canola	cytosol	52.02	60.73
CDX87066	Canola	cytosol	52.02	60.73
Bra036562.1-P	Field mustard	cytosol	51.57	59.9
GSMUA_Achr2P08480_001	Banana	mitochondrion	67.71	59.68
HORVU1Hr1G079570.13	Barley	plastid	74.89	58.8
CDY48150	Canola	mitochondrion	28.7	53.33
Os09t0547500-01	Rice	cytosol, plastid	54.26	53.3
Os02t0628000-00	Rice	cytosol	57.4	52.46
Os01t0588900-01	Rice	cytosol	56.05	51.65
Os04t0518800-01	Rice	cytosol	56.5	50.4
AT5G26140.2	Thale cress	cytosol	36.77	50.0
Os03t0857900-02	Rice	nucleus	54.26	49.19
Os05t0591600-01	Rice	cytosol	55.16	46.24
Os03t0697200-00	Rice	nucleus	37.22	34.16

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:4339472	ProteinID:AAV67819.1	EMBL:AK068633	ProteinID:BAF18101.1
ProteinID:BAS95122.1	ProteinID:EEE64539.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam	EnsemblPlantsGene:Os05g0541200	EnsemblPlants:Os05t0541200-01
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF16	UniProt:Q5TKP8	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI000046F53E	RefSeq:XP_015640405.1	SEG:seg	:	:	:

Description

LONELY GUY LIKE PHOSPHORIBOHYDROLASE 7Similar to Lysine decarboxylase-like protein. (Os05t0541200-01)

Coordinates

chr5:+:26868399..26870416

Molecular Weight (calculated)

23839.7 Da

IEP (calculated)

4.818

GRAVY (calculated)

0.040

Length

223 amino acids

Sequence
(BLAST)

001: MGDGAEAAGA TAASRFGTIC VFCGSNAGRR RVFGDAALDL GHELVRRGVD LVYGGGSIGL MGLIARTVLD GGRRVVGVIP RALMAVEISG ESVGEVIVVQ
101: DMHERKAEMA RRSKAFIALP GGYGTMEELL EMITWCQLGI HDKPVGLLNV DGYYDPLLAL FDKGEAEGFI NSDCRQIFVS APTASELLTK MEQYTRLHQE
201: VAPATSWEIS ELGYGRTPGA DQS

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.