Factsheet for Os03t0109300-01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6
nucleus 1
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os10t0479500-01	Rice	mitochondrion	85.31	88.24
TraesCS4A01G413200.1	Wheat	mitochondrion	82.46	84.47
TraesCS4B01G250400.1	Wheat	mitochondrion	81.99	84.39
TraesCS4D01G310800.1	Wheat	mitochondrion	81.04	83.41
TraesCS4B01G313800.1	Wheat	mitochondrion	80.57	82.93
TraesCS4D01G250300.1	Wheat	mitochondrion	26.07	80.88
TraesCS4A01G054500.1	Wheat	mitochondrion	25.59	79.41
AT5G03270.1	Thale cress	cytosol	71.56	75.12
CDY44352	Canola	cytosol	72.04	74.88
TraesCS4D01G250200.1	Wheat	mitochondrion	39.81	74.34
CDY62895	Canola	cytosol	69.19	73.74
Zm00001d029127_P001	Maize	mitochondrion	75.36	70.04
EER94862	Sorghum	mitochondrion, plastid	71.56	68.95
Os02t0628000-00	Rice	cytosol	73.93	63.93
Os04t0518800-01	Rice	cytosol	74.88	63.2
Os01t0588900-01	Rice	cytosol	68.72	59.92
Os01t0708500-01	Rice	mitochondrion	62.56	59.19
Os03t0857900-02	Rice	nucleus	68.72	58.94
Os09t0547500-01	Rice	cytosol, plastid	63.03	58.59
Os05t0541200-01	Rice	cytosol, plasma membrane	61.14	57.85
Os05t0591600-01	Rice	cytosol	69.67	55.26
Os03t0697200-00	Rice	nucleus	36.49	31.69

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	EntrezGene:4331344	ProteinID:AAN61486.1	ProteinID:ABF93572.1	ProteinID:ABF93573.1
EMBL:AK099538	ProteinID:BAF10620.1	ProteinID:BAS81902.1	ProteinID:EAZ25308.1	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	InterPro:LOG	InterPro:LOG_fam
EnsemblPlantsGene:Os03g0109300	EnsemblPlants:Os03t0109300-01	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF40	UniProt:Q8H7U8
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00000AD291	RefSeq:XP_015628428.1	SEG:seg	:

Description

LONELY GUY LIKE PHOSPHORIBOHYDROLASE 3Similar to Lysine decarboxylase-like protein. (Os03t0109300-01)

Coordinates

chr3:+:537614..542549

Molecular Weight (calculated)

23223.8 Da

IEP (calculated)

5.597

GRAVY (calculated)

-0.171

Length

211 amino acids

Sequence
(BLAST)

001: MRQQQQQQQE SRFKRTCVFC GSSQGNKTTY RDAAVDLAKE LVARGIDLVY GGGSIGLMGL VSQAVYDGGR HVIGVIPKTL MTPEIIGETV GEVRPVSDMH
101: QRKAEMARQS DAFIALPGGY GTLEELLEVI TWAQLGIHHK PVGLLNVDGY YNSLLTFIDQ AVEEGFISPS ARRIIVSAPT AQELMDKLEE YVPYHDRVAS
201: GLNWETGHLG F

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.