Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- plastid 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH15614 | Soybean | cytosol, extracellular, plastid | 14.4 | 50.72 |
| Solyc06g075090.2.1 | Tomato | cytosol | 32.1 | 40.84 |
| AT2G28305.1 | Thale cress | cytosol | 33.74 | 38.5 |
| VIT_06s0004g02680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 33.33 | 38.21 |
| Os10t0479500-01 | Rice | mitochondrion | 31.69 | 37.75 |
| Bra011962.1-P | Field mustard | cytosol | 32.92 | 37.56 |
| CDY30498 | Canola | cytosol | 32.92 | 37.56 |
| CDY04551 | Canola | cytosol | 32.92 | 37.56 |
| Bra034399.1-P | Field mustard | cytosol | 32.92 | 37.56 |
| CDX77168 | Canola | cytosol | 32.92 | 37.56 |
| Os05t0541200-01 | Rice | cytosol, plasma membrane | 34.16 | 37.22 |
| CDX71364 | Canola | cytosol | 32.51 | 37.09 |
| KRH15578 | Soybean | cytosol | 11.52 | 36.84 |
| Os03t0109300-01 | Rice | mitochondrion | 31.69 | 36.49 |
| Os01t0708500-01 | Rice | mitochondrion | 33.33 | 36.32 |
| Os01t0588900-01 | Rice | cytosol | 34.57 | 34.71 |
| PGSC0003DMT400020890 | Potato | cytosol | 32.51 | 34.65 |
| Os02t0628000-00 | Rice | cytosol | 34.16 | 34.02 |
| Solyc11g069570.1.1 | Tomato | cytosol | 32.51 | 33.76 |
| Os03t0857900-02 | Rice | nucleus | 34.16 | 33.74 |
| Os04t0518800-01 | Rice | cytosol | 34.16 | 33.2 |
| Os09t0547500-01 | Rice | cytosol, plastid | 30.45 | 32.6 |
| Os05t0591600-01 | Rice | cytosol | 34.98 | 31.95 |
Protein Annotations
| EnsemblPlants:Os03t0697200-00 | EnsemblPlantsGene:Os03g0697200 | Gene3D:3.40.50.450 | InterPro:LOG_fam | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF25 |
| PFAM:PF03641 | ProteinID:BAS85890.1 | SEG:seg | SUPFAM:SSF102405 | UniParc:UPI000393AA23 | UniProt:A0A0P0W2D9 |
| MapMan:35.1 | : | : | : | : | : |
Description
LONELY GUY LIKE PHOSPHORIBOHYDROLASE 4Similar to carboxy-lyase. (Os03t0697200-00)
Coordinates
chr3:+:27943411..27945040
Molecular Weight (calculated)
26212.2 Da
IEP (calculated)
11.400
GRAVY (calculated)
-0.655
Length
243 amino acids
Sequence
(BLAST)
(BLAST)
001: MDANHDKVVE SGSRGGRGPV RTICVFCGSR RGNRPSFSAA ALDLGKQLVE RELDLVYGGG SGGLMGLVSK TVHDGGRHVL GYARRRTYTV SGETLGEAKV
101: VRDMHERKSE MAKHADAFIA LPGELLADLS TPPPPLSLSL SHTHTHIDTM TLMQTQTRIN CRWLRDNRRT VGDHSVGAAG DPQQTGGAAQ CGRLLQQLTL
201: AVRQGRRGRV HRRRGAEHLR PRRQRRRTTD QADGGGGSGS GGG
101: VRDMHERKSE MAKHADAFIA LPGELLADLS TPPPPLSLSL SHTHTHIDTM TLMQTQTRIN CRWLRDNRRT VGDHSVGAAG DPQQTGGAAQ CGRLLQQLTL
201: AVRQGRRGRV HRRRGAEHLR PRRQRRRTTD QADGGGGSGS GGG
001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE
Arabidopsis Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.