CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra034399.1-P	Field mustard	cytosol	100.0	100.0
CDX77168	Canola	cytosol	99.06	99.06
CDY04551	Canola	cytosol	96.24	96.24
CDX71364	Canola	cytosol	96.24	96.24
AT2G28305.1	Thale cress	cytosol	95.31	95.31
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	86.39	86.79
CDX91344	Canola	mitochondrion	79.81	85.43
KRH22873	Soybean	cytosol	83.1	84.69
KRH26448	Soybean	cytosol	82.63	84.21
KRH29895	Soybean	cytosol	85.92	83.18
CDY46763	Canola	cytosol	79.81	82.52
CDX79722	Canola	cytosol	79.81	82.52
CDY52759	Canola	cytosol	81.69	80.93
Solyc06g075090.2.1	Tomato	cytosol	72.3	80.63
CDY30875	Canola	cytosol	80.75	80.0
CDX73553	Canola	cytosol	73.71	79.7
CDY13293	Canola	cytosol	44.13	79.66
KRH25030	Soybean	cytosol	86.39	78.97
CDX76213	Canola	cytosol	74.18	78.22
CDY62895	Canola	cytosol	71.36	76.77
CDY44352	Canola	cytosol	72.77	76.35
CDX74979	Canola	cytosol	80.28	74.67
PGSC0003DMT400020890	Potato	cytosol	78.4	73.25
CDY04985	Canola	cytosol	73.71	73.02
Solyc11g069570.1.1	Tomato	cytosol	79.34	72.22
CDX78180	Canola	cytosol	81.22	71.78
KRH32483	Soybean	cytosol, golgi, mitochondrion	59.15	69.61
CDX69118	Canola	cytosol	69.01	65.62
CDY40411	Canola	cytosol	65.26	65.26
CDY32063	Canola	cytosol	63.85	63.85
CDY52642	Canola	cytosol	69.95	63.68
CDX76318	Canola	cytosol	68.08	63.6
CDX69717	Canola	cytosol	64.32	63.43
CDX97157	Canola	cytosol	64.32	63.43
CDX79649	Canola	cytosol	54.93	63.24
CDY65870	Canola	cytosol	63.85	62.1
CDY19786	Canola	cytosol	55.4	61.78
CDX87066	Canola	cytosol	55.4	61.78
CDX91185	Canola	cytosol	64.32	61.16
CDY17522	Canola	cytosol	60.56	56.33
CDY48150	Canola	mitochondrion	30.05	53.33
Os03t0697200-00	Rice	nucleus	37.56	32.92

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:A0A078H116	UniProt:A0A078H116	EnsemblPlants:CDY30498	ProteinID:CDY30498
ProteinID:CDY30498.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00045213001	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF39	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0001B8379C
SEG:seg	:	:	:	:	:

Description

BnaA04g16350DCytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A078H116]

Coordinates

chrLK032254:-:63922..68025

Molecular Weight (calculated)

23170.0 Da

IEP (calculated)

6.248

GRAVY (calculated)

-0.039

Length

213 amino acids

Sequence
(BLAST)

001: MEIEPKFKRI CVFCGSSAGN KTSYRDAAIE LGAELVSRNI DLVYGGGSIG LMGLISQAVY NGGRHVIGVI PKTLMPKEIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDNAVEEGF ISPTARHIIV SAPSAKDLVK KLEEYVPRHE KVASKKSWEI
201: EQIGLSPTCE ISR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.