Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY30498 | Canola | cytosol | 95.31 | 95.31 |
| CDX77168 | Canola | cytosol | 95.31 | 95.31 |
| Bra034399.1-P | Field mustard | cytosol | 95.31 | 95.31 |
| CDY04551 | Canola | cytosol | 93.43 | 93.43 |
| CDX71364 | Canola | cytosol | 93.43 | 93.43 |
| Bra011962.1-P | Field mustard | cytosol | 93.43 | 93.43 |
| VIT_06s0004g02680.t01 | Wine grape | cytosol, mitochondrion, nucleus | 87.79 | 88.21 |
| KRH22873 | Soybean | cytosol | 84.04 | 85.65 |
| KRH26448 | Soybean | cytosol | 83.57 | 85.17 |
| KRH29895 | Soybean | cytosol | 87.32 | 84.55 |
| Solyc06g075090.2.1 | Tomato | cytosol | 74.65 | 83.25 |
| KRH25030 | Soybean | cytosol | 87.79 | 80.26 |
| AT3G53450.1 | Thale cress | cytosol | 80.75 | 80.0 |
| AT5G03270.1 | Thale cress | cytosol | 73.71 | 78.11 |
| PGSC0003DMT400020890 | Potato | cytosol | 80.75 | 75.44 |
| AT2G37210.2 | Thale cress | cytosol | 83.57 | 74.48 |
| AT5G06300.1 | Thale cress | cytosol | 75.59 | 74.19 |
| Solyc11g069570.1.1 | Tomato | cytosol | 80.75 | 73.5 |
| KRH32483 | Soybean | cytosol, golgi, mitochondrion | 61.03 | 71.82 |
| AT2G35990.1 | Thale cress | cytosol | 67.14 | 67.14 |
| AT4G35190.1 | Thale cress | cytosol | 68.54 | 64.04 |
| AT5G11950.1 | Thale cress | cytosol | 64.32 | 63.43 |
| AT5G26140.2 | Thale cress | cytosol | 38.03 | 49.39 |
| Os03t0697200-00 | Rice | nucleus | 38.5 | 33.74 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | EntrezGene:817376 | UniProt:A0A178VS96 | ProteinID:AAM15149.1 | ProteinID:AAM15229.1 |
| ProteinID:AEC08102.1 | EMBL:AF361629 | ArrayExpress:AT2G28305 | EnsemblPlantsGene:AT2G28305 | RefSeq:AT2G28305 | TAIR:AT2G28305 |
| RefSeq:AT2G28305-TAIR-G | EnsemblPlants:AT2G28305.1 | TAIR:AT2G28305.1 | EMBL:AY081836 | EMBL:AY086265 | Unigene:At.19115 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 |
| GO:GO:0009987 | GO:GO:0016787 | InterPro:LOG | Symbol:LOG1 | InterPro:LOG_fam | RefSeq:NP_565668.1 |
| ProteinID:OAP09249.1 | PFAM:PF03641 | PO:PO:0000013 | PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF39 |
| UniProt:Q8RUN2 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI00000A3408 | SEG:seg | : |
Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
Coordinates
chr2:+:12081023..12084678
Molecular Weight (calculated)
23204.2 Da
IEP (calculated)
6.515
GRAVY (calculated)
-0.019
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.