CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH29895	Soybean	cytosol	92.7	98.18
KRH22873	Soybean	cytosol	81.12	90.43
KRH26448	Soybean	cytosol	80.69	89.95
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	80.69	88.68
AT2G28305.1	Thale cress	cytosol	80.26	87.79
Bra034399.1-P	Field mustard	cytosol	78.97	86.39
CDY30498	Canola	cytosol	78.97	86.39
CDX77168	Canola	cytosol	78.54	85.92
Bra011962.1-P	Field mustard	cytosol	78.11	85.45
CDX71364	Canola	cytosol	78.11	85.45
CDY04551	Canola	cytosol	78.11	85.45
Solyc06g075090.2.1	Tomato	cytosol	68.67	83.77
KRG95991	Soybean	cytosol	78.54	83.56
KRH67693	Soybean	cytosol	78.54	83.56
KRH19875	Soybean	cytosol	77.68	82.65
TraesCS4D01G250300.1	Wheat	mitochondrion	23.61	80.88
Zm00001d014016_P001	Maize	mitochondrion, nucleus	70.82	79.71
EER94070	Sorghum	mitochondrion	70.82	79.71
TraesCS4A01G054500.1	Wheat	mitochondrion	23.18	79.41
PGSC0003DMT400020890	Potato	cytosol	76.82	78.51
TraesCS1A01G156100.1	Wheat	mitochondrion	69.96	78.37
TraesCS1B01G173200.1	Wheat	mitochondrion	69.96	78.37
TraesCS1D01G154700.1	Wheat	mitochondrion	69.96	78.37
TraesCS4A01G413200.1	Wheat	mitochondrion	67.81	76.7
TraesCS4D01G310800.1	Wheat	mitochondrion	66.95	76.1
Solyc11g069570.1.1	Tomato	cytosol	75.97	75.64
TraesCS4B01G250400.1	Wheat	mitochondrion	66.52	75.61
KRH07771	Soybean	cytosol	23.61	75.34
TraesCS4B01G313800.1	Wheat	mitochondrion	66.09	75.12
KRH15614	Soybean	cytosol, extracellular, plastid	21.89	73.91
KRH05931	Soybean	cytosol	67.38	73.02
KRH32819	Soybean	cytosol	66.95	72.9
KRH72214	Soybean	cytosol	66.52	72.43
KRH51716	Soybean	cytosol	68.67	72.4
KRH15578	Soybean	cytosol	23.61	72.37
KRH67989	Soybean	cytosol	65.67	71.83
KRH17410	Soybean	cytosol	65.24	71.36
KRG96247	Soybean	cytosol	65.24	71.36
KRH61054	Soybean	cytosol	68.24	70.67
KRH32483	Soybean	cytosol, golgi, mitochondrion	54.08	69.61
TraesCS2D01G376900.1	Wheat	cytosol	72.96	69.11
TraesCS2A01G380600.1	Wheat	cytosol	72.96	69.11
EES05457	Sorghum	cytosol	71.67	68.44
Zm00001d003013_P001	Maize	cytosol	72.96	68.27
KRH32950	Soybean	cytosol	58.8	66.83
EES11120	Sorghum	cytosol	73.82	66.41
KRH52208	Soybean	cytosol	60.09	65.73
Zm00001d029127_P001	Maize	mitochondrion	63.52	65.2
Zm00001d025868_P002	Maize	cytosol	69.96	64.43
KRH05430	Soybean	cytosol	59.66	64.35
EER94862	Sorghum	mitochondrion, plastid	60.09	63.93
TraesCS1D01G003500.1	Wheat	cytosol	65.24	63.6
HORVU2Hr1G089620.5	Barley	cytosol	71.67	63.5
KRH39935	Soybean	cytosol	60.52	63.23
KRH61527	Soybean	cytosol	60.52	62.67
TraesCS4D01G250200.1	Wheat	mitochondrion	30.04	61.95
TraesCS2B01G397600.2	Wheat	cytosol	72.53	60.36
KRH32487	Soybean	cytosol	4.29	52.63
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	36.91	28.48

Protein Annotations

EntrezGene:100815735	MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A0A0R4J4S8	EMBL:ACUP02007196	EnsemblPlantsGene:GLYMA_12G076700
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	EnsemblPlants:KRH25030	ProteinID:KRH25030	ProteinID:KRH25030.1	InterPro:LOG
InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF39	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI0001B8379B	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr12:-:5885738..5891879

Molecular Weight (calculated)

25868.3 Da

IEP (calculated)

6.255

GRAVY (calculated)

-0.308

Length

233 amino acids

Sequence
(BLAST)

001: MIEKKTQCEK KEKMEGEETE MKQQSRFKRI CVFCGSSPGN KSSYKDAAIE LGKELVSRNI DLVYGGGSIG LMGLVSQAVY EGGRHVIGVI PKTLMPREIT
101: GETVGEVMAV ADMHQRKAEM AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VDGYYNSLLC FIDKAVEEGF ISPKARHIIV SAPSTKELVK
201: KMEEYFPQHE RVASKLSWET EQIDYSSNCG MSR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.