Factsheet for TraesCS1A01G156100.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 7

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G154700.1	Wheat	mitochondrion	99.52	99.52
TraesCS1B01G173200.1	Wheat	mitochondrion	99.52	99.52
Os10t0479500-01	Rice	mitochondrion	93.27	95.1
Zm00001d014016_P001	Maize	mitochondrion, nucleus	91.83	92.27
EER94070	Sorghum	mitochondrion	91.83	92.27
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	81.73	80.19
PGSC0003DMT400055525	Potato	cytosol	82.69	78.9
Solyc09g007830.2.1	Tomato	cytosol	82.69	78.9
TraesCS4A01G413200.1	Wheat	mitochondrion	77.88	78.64
Bra003135.1-P	Field mustard	cytosol	62.98	78.44
Bra023107.1-P	Field mustard	cytosol	77.4	78.16
Bra017202.1-P	Field mustard	cytosol	78.85	78.1
GSMUA_Achr6P36490_001	Banana	cytosol	80.77	77.42
Bra039788.1-P	Field mustard	cytosol	62.02	77.25
CDY44352	Canola	cytosol	75.0	76.85
Solyc06g075090.2.1	Tomato	cytosol	70.19	76.44
Bra007000.1-P	Field mustard	cytosol	61.54	76.19
VIT_08s0040g01780.t01	Wine grape	cytosol	79.81	76.15
Solyc10g084150.1.1	Tomato	cytosol	80.29	75.91
CDY62895	Canola	cytosol	72.12	75.76
GSMUA_Achr1P09040_001	Banana	cytosol	79.33	75.69
PGSC0003DMT400027157	Potato	cytosol	79.81	75.45
KRG95991	Soybean	cytosol	79.33	75.34
KRH19875	Soybean	cytosol	79.33	75.34
KRH67693	Soybean	cytosol	79.33	75.34
TraesCS4A01G054500.1	Wheat	mitochondrion	24.52	75.0
AT5G03270.1	Thale cress	cytosol	72.12	74.63
Bra034399.1-P	Field mustard	cytosol	75.96	74.18
KRH22873	Soybean	cytosol	74.52	74.16
KRH29895	Soybean	cytosol	78.37	74.09
KRH15578	Soybean	cytosol	26.92	73.68
KRH26448	Soybean	cytosol	74.04	73.68
Bra011962.1-P	Field mustard	cytosol	75.0	73.24
KRH25030	Soybean	cytosol	78.37	69.96
KRH07771	Soybean	cytosol	24.04	68.49
PGSC0003DMT400020890	Potato	cytosol	75.0	68.42
Solyc11g069570.1.1	Tomato	cytosol	76.44	67.95
KRH15614	Soybean	cytosol, extracellular, plastid	22.12	66.67
KRH32483	Soybean	cytosol, golgi, mitochondrion	53.85	61.88
TraesCS1A01G362500.1	Wheat	cytosol	63.94	61.86
TraesCS2A01G380600.1	Wheat	cytosol	73.08	61.79
TraesCS3A01G211100.1	Wheat	cytosol	66.83	59.4
TraesCS3A01G251500.1	Wheat	plastid	63.94	58.08
TraesCS5A01G347400.1	Wheat	cytosol	68.27	57.72
TraesCS5A01G347500.1	Wheat	cytosol	67.79	57.55
TraesCS4A01G277200.1	Wheat	cytosol	59.62	55.86
TraesCS4A01G317900.1	Wheat	plastid	64.9	55.1
TraesCS4A01G318100.1	Wheat	plastid	64.42	54.03

Protein Annotations

EnsemblPlants:TraesCS1A01G156100.1	EnsemblPlantsGene:TraesCS1A01G156100	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF17	PFAM:PF03641	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2	:

Description

No Description!

Coordinates

chr1A:+:276802517..276805534

Molecular Weight (calculated)

22819.6 Da

IEP (calculated)

6.603

GRAVY (calculated)

-0.045

Length

208 amino acids

Sequence
(BLAST)

001: MRQSRFKRIC VFCGSSQGKK RSYHDAAIEL GNELVARGVD LVYGGGSIGL MGMVSQAVHD GGRHVIGVIP KTLMTPEISG ETVGEVRAVA DMHQRKAEMA
101: RHSDAFIALP GGYGTLEELL EVITWAQLGI HHKPVGLLNV DGYYNSLLTF IDKAVEEGFI NTSARRIIVL APTAEELMEK LENYVPYHDR VASKLNWDIA
201: AEIGHLGY

Best Arabidopsis Sequence Match ( AT2G37210.1 )
(BLAST)

001: MEIKGESMQK SKFRRICVFC GSSQGKKSSY QDAAVDLGNE LVSRNIDLVY GGGSIGLMGL VSQAVHDGGR HVIGIIPKTL MPRELTGETV GEVRAVADMH
101: QRKAEMAKHS DAFIALPGGY GTLEELLEVI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVEEGFISPT AREIIVSAPT AKELVKKLEE YAPCHERVAT
201: KLCWEMERIG YSSEE

Arabidopsis Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:F4IQ18]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.