Factsheet for TraesCS5A01G347400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G353600.1	Wheat	cytosol	96.34	95.18
TraesCS5B01G348400.1	Wheat	cytosol	93.09	93.09
TraesCS5A01G347500.1	Wheat	cytosol	86.99	87.35
EER97131	Sorghum	cytosol	80.89	84.68
Zm00001d021450_P001	Maize	cytosol	79.67	84.48
OQU88832	Sorghum	cytosol, plastid	73.58	79.39
GSMUA_Achr2P03620_001	Banana	cytosol	68.7	77.17
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	67.89	76.26
GSMUA_AchrUn_...	Banana	cytosol	62.2	75.74
GSMUA_Achr7P04070_001	Banana	cytosol	63.82	73.02
VIT_18s0001g00210.t01	Wine grape	cytosol	64.23	72.15
Os09t0547500-01	Rice	cytosol, plastid	66.26	71.81
VIT_03s0038g03420.t01	Wine grape	cytosol	65.45	70.31
TraesCS1A01G156100.1	Wheat	mitochondrion	57.72	68.27
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	21.95	67.5
AT4G35190.1	Thale cress	cytosol	61.79	66.67
GSMUA_AchrUn_...	Banana	cytosol	66.67	66.4
TraesCS4A01G054500.1	Wheat	mitochondrion	17.89	64.71
CDX76318	Canola	cytosol	59.35	64.04
Bra020803.1-P	Field mustard	cytosol	58.94	63.6
CDX69118	Canola	cytosol	57.72	63.39
TraesCS4A01G413200.1	Wheat	mitochondrion	52.85	63.11
Bra011592.1-P	Field mustard	cytosol	59.76	62.82
CDY52642	Canola	cytosol	59.35	62.39
TraesCS3A01G211100.1	Wheat	cytosol	56.91	59.83
TraesCS1A01G362500.1	Wheat	cytosol	51.63	59.07
TraesCS2A01G380600.1	Wheat	cytosol	58.94	58.94
CDY17522	Canola	cytosol	53.66	57.64
TraesCS4A01G317900.1	Wheat	plastid	55.28	55.51
TraesCS3A01G251500.1	Wheat	plastid	50.81	54.59
TraesCS4A01G318100.1	Wheat	plastid	53.66	53.23
TraesCS4A01G277200.1	Wheat	cytosol	47.97	53.15
KRH32487	Soybean	cytosol	3.66	47.37

Protein Annotations

EnsemblPlants:TraesCS5A01G347400.1	EnsemblPlantsGene:TraesCS5A01G347400	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5A:+:549953172..549954958

Molecular Weight (calculated)

26032.2 Da

IEP (calculated)

5.027

GRAVY (calculated)

-0.063

Length

246 amino acids

Sequence
(BLAST)

001: MQGGDGGMEE TPAAAKNRGG GVGEGAAVEV QEGPRFRRVC VFCGSSSGKR SSYRDAAVEL GKELVARGMD LVYGGGSLGL MGEVSEAVHK GGGHVIGIIP
101: TTLMGKEITG VTVGEVVAVS GMHERKAAMA RNADAFIALP GGYGTLDELL EVIAWAQLGI HTKPVGLLNV DGYYDFLLAF IDKAVDDGFI RPSQRHIFVS
201: APDARDLVRK LEEYVAVEEE DPATPKLRWE IEQAGYKATL QAGIAR

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.