Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76318 | Canola | cytosol | 91.67 | 91.67 |
| Bra020803.1-P | Field mustard | cytosol | 91.23 | 91.23 |
| Bra011592.1-P | Field mustard | cytosol | 89.47 | 87.18 |
| CDY52642 | Canola | cytosol | 89.04 | 86.75 |
| CDY17522 | Canola | cytosol | 85.09 | 84.72 |
| CDX69118 | Canola | cytosol | 82.89 | 84.38 |
| VIT_14s0036g00590.t01 | Wine grape | cytosol, extracellular | 29.39 | 83.75 |
| VIT_03s0038g03420.t01 | Wine grape | cytosol | 83.33 | 82.97 |
| VIT_18s0001g00210.t01 | Wine grape | cytosol | 78.07 | 81.28 |
| GSMUA_Achr2P03620_001 | Banana | cytosol | 72.37 | 75.34 |
| GSMUA_Achr1P07310_001 | Banana | cytosol, mitochondrion | 70.61 | 73.52 |
| GSMUA_AchrUn_... | Banana | cytosol | 64.47 | 72.77 |
| GSMUA_Achr7P04070_001 | Banana | cytosol | 66.67 | 70.7 |
| AT5G06300.1 | Thale cress | cytosol | 66.67 | 70.05 |
| AT2G28305.1 | Thale cress | cytosol | 64.04 | 68.54 |
| AT5G03270.1 | Thale cress | cytosol | 60.09 | 68.16 |
| Zm00001d021450_P001 | Maize | cytosol | 69.3 | 68.1 |
| AT3G53450.1 | Thale cress | cytosol | 63.6 | 67.44 |
| EER97131 | Sorghum | cytosol | 68.86 | 66.81 |
| OQU88832 | Sorghum | cytosol, plastid | 65.79 | 65.79 |
| GSMUA_AchrUn_... | Banana | cytosol | 70.18 | 64.78 |
| TraesCS5B01G348400.1 | Wheat | cytosol | 68.42 | 63.41 |
| AT2G35990.1 | Thale cress | cytosol | 57.89 | 61.97 |
| TraesCS5D01G353600.1 | Wheat | cytosol | 67.54 | 61.85 |
| TraesCS5A01G347400.1 | Wheat | cytosol | 66.67 | 61.79 |
| AT2G37210.2 | Thale cress | cytosol | 64.04 | 61.09 |
| TraesCS5A01G347500.1 | Wheat | cytosol | 64.91 | 60.41 |
| TraesCS5B01G348300.1 | Wheat | cytosol | 66.23 | 60.4 |
| Os09t0547500-01 | Rice | cytosol, plastid | 59.21 | 59.47 |
| TraesCS5B01G348600.1 | Wheat | cytosol | 62.28 | 58.92 |
| AT5G11950.1 | Thale cress | cytosol | 55.26 | 58.33 |
| KRH32487 | Soybean | cytosol | 3.95 | 47.37 |
| AT5G26140.2 | Thale cress | cytosol | 32.89 | 45.73 |
Protein Annotations
| MapMan:11.4.1.2 | Gene3D:3.40.50.450 | EntrezGene:829672 | UniProt:A0A178UWQ5 | ProteinID:AEE86478.1 | ArrayExpress:AT4G35190 |
| EnsemblPlantsGene:AT4G35190 | RefSeq:AT4G35190 | TAIR:AT4G35190 | RefSeq:AT4G35190-TAIR-G | EnsemblPlants:AT4G35190.1 | TAIR:AT4G35190.1 |
| EMBL:AY087308 | EMBL:BT026408 | ProteinID:CAB36726.1 | ProteinID:CAB80236.1 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0005737 | GO:GO:0005829 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 |
| InterPro:LOG | InterPro:LOG_fam | RefSeq:NP_567978.1 | ProteinID:OAO97332.1 | PFAM:PF03641 | PO:PO:0000013 |
| PO:PO:0000014 | PO:PO:0000037 | PO:PO:0000293 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0009001 | PO:PO:0009005 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 |
| PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020100 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF26 | UniProt:Q8LBB7 | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | UniParc:UPI00000ABA4D | SEG:seg |
Description
LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
Coordinates
chr4:+:16746189..16748455
Molecular Weight (calculated)
25191.4 Da
IEP (calculated)
6.244
GRAVY (calculated)
-0.106
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.