Factsheet for TraesCS5B01G348400.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G353600.1	Wheat	cytosol	95.12	93.98
TraesCS5A01G347400.1	Wheat	cytosol	93.09	93.09
TraesCS5B01G348300.1	Wheat	cytosol	91.06	89.6
TraesCS5B01G348600.1	Wheat	cytosol	85.77	87.55
EER97131	Sorghum	cytosol	82.11	85.96
Zm00001d021450_P001	Maize	cytosol	80.49	85.34
OQU88832	Sorghum	cytosol, plastid	74.8	80.7
GSMUA_Achr2P03620_001	Banana	cytosol	68.7	77.17
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	67.07	75.34
GSMUA_AchrUn_...	Banana	cytosol	61.38	74.75
Os09t0547500-01	Rice	cytosol, plastid	67.07	72.69
GSMUA_Achr7P04070_001	Banana	cytosol	63.41	72.56
VIT_18s0001g00210.t01	Wine grape	cytosol	64.23	72.15
VIT_03s0038g03420.t01	Wine grape	cytosol	66.67	71.62
AT4G35190.1	Thale cress	cytosol	63.41	68.42
TraesCS1B01G173200.1	Wheat	mitochondrion	57.72	68.27
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	21.95	67.5
GSMUA_AchrUn_...	Banana	cytosol	66.26	65.99
CDX76318	Canola	cytosol	60.98	65.79
Bra020803.1-P	Field mustard	cytosol	60.57	65.35
Bra011592.1-P	Field mustard	cytosol	61.38	64.53
CDX69118	Canola	cytosol	58.54	64.29
CDY52642	Canola	cytosol	60.98	64.1
TraesCS4B01G250400.1	Wheat	mitochondrion	52.85	63.41
TraesCS4B01G313800.1	Wheat	mitochondrion	52.44	62.93
TraesCS1B01G379700.1	Wheat	cytosol	52.44	60.0
CDY17522	Canola	cytosol	55.28	59.39
TraesCS3B01G241600.1	Wheat	cytosol	56.5	58.16
TraesCS5B01G561400.1	Wheat	plastid	55.28	55.06
TraesCS1B01G471300.1	Wheat	cytosol, plastid	58.54	53.73
TraesCS5B01G561300.1	Wheat	plastid	54.47	53.6
TraesCS3B01G281000.1	Wheat	cytosol	49.19	53.54
TraesCS4B01G035700.1	Wheat	cytosol	47.97	52.21
TraesCS2B01G397600.2	Wheat	cytosol	58.94	51.79
KRH32487	Soybean	cytosol	3.66	47.37

Protein Annotations

EnsemblPlants:TraesCS5B01G348400.1	EnsemblPlantsGene:TraesCS5B01G348400	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr5B:+:529686963..529688765

Molecular Weight (calculated)

26103.4 Da

IEP (calculated)

5.699

GRAVY (calculated)

-0.002

Length

246 amino acids

Sequence
(BLAST)

001: MQGGGGGGME EAAAAAKNRS GGVGERAAVE VLEGPRFRRV CVFCGSSSGK RSSYRDAAVE LGKELVARRM DLVYGGGSLG LMGEVSEAVH KAGGHVIGVI
101: PTTLMGKEIT GETVGEVVAV SGMHERKAAM ARNADAFIAL PGGYGTLDEL LEVIAWAQLG IHTKPVGLLN VDGYYDFLLA FIDKAVDDGF IRPSQRHIFV
201: SAPDARSLVR KLEEYVAVVD DPATPKLRWE IEQVGYNATL QAEIAR

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.