Factsheet for TraesCS1B01G471300.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 2
golgi 2
cytosol 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, plastid, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G444500.1	Wheat	cytosol	92.91	91.21
HORVU1Hr1G094290.7	Barley	plastid	85.45	79.79
Os05t0591600-01	Rice	cytosol	76.87	77.44
KXG22670	Sorghum	plastid	73.88	76.15
TraesCS3B01G241600.1	Wheat	cytosol	67.16	75.31
KRH32819	Soybean	cytosol	58.96	73.83
KRH72214	Soybean	cytosol	58.58	73.36
Zm00001d039174_P001	Maize	plastid	72.39	73.21
GSMUA_Achr8P04060_001	Banana	cytosol	60.82	72.12
VIT_08s0007g02480.t01	Wine grape	cytosol	57.84	71.76
GSMUA_Achr2P08380_001	Banana	cytosol	61.19	71.62
KRG96247	Soybean	cytosol	56.72	71.36
KRH67989	Soybean	cytosol	56.72	71.36
CDY04985	Canola	cytosol	55.22	68.84
Solyc10g082020.1.1	Tomato	cytosol	55.6	68.66
AT5G06300.1	Thale cress	cytosol	54.85	67.74
TraesCS4B01G250400.1	Wheat	mitochondrion	51.49	67.32
Solyc01g007270.1.1	Tomato	cytosol	17.54	67.14
TraesCS1B01G173200.1	Wheat	mitochondrion	51.87	66.83
TraesCS4B01G313800.1	Wheat	mitochondrion	50.75	66.34
PGSC0003DMT400042349	Potato	cytosol	53.73	66.06
GSMUA_Achr6P35930_001	Banana	cytosol	53.73	64.57
PGSC0003DMT400072345	Potato	cytosol	54.85	64.47
TraesCS5B01G348400.1	Wheat	cytosol	53.73	58.54
TraesCS1B01G379700.1	Wheat	cytosol	46.27	57.67
TraesCS5B01G348300.1	Wheat	cytosol	53.73	57.6
TraesCS5B01G561400.1	Wheat	plastid	52.99	57.49
TraesCS5B01G348600.1	Wheat	cytosol	51.12	56.85
TraesCS5B01G561300.1	Wheat	plastid	52.61	56.4
TraesCS3B01G281000.1	Wheat	cytosol	47.39	56.19
TraesCS2B01G397600.2	Wheat	cytosol	54.85	52.5
TraesCS4B01G035700.1	Wheat	cytosol	43.66	51.77
Bra028735.1-P	Field mustard	cytosol	14.93	31.75

Protein Annotations

EnsemblPlants:TraesCS1B01G471300.1	EnsemblPlantsGene:TraesCS1B01G471300	Gene3D:3.40.50.450	InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223
PANTHER:PTHR31223:SF13	PFAM:PF03641	SEG:seg	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	MapMan:11.4.1.2

Description

No Description!

Coordinates

chr1B:+:679567332..679571771

Molecular Weight (calculated)

28403.3 Da

IEP (calculated)

4.802

GRAVY (calculated)

0.071

Length

268 amino acids

Sequence
(BLAST)

001: MSITAAAVVA EPRAFAIGAA PAVEMGPELA PPEPSRGLGQ DGGVAVAAAE GRASRFRRIC VYCGSAKGRK ASYQDAALDL GKEMVERGID LVYGGGSIGL
101: MGLVSHAVHA GGRHVIGIIP RSLMPREVTG DPVGEVRAVS GMHERKAEMA RFADAFIALP GGYGTLEELL EVITWAQLGI HKKPVGLLNV DGFYDPLLSF
201: IDVAVNEGFI TQEARQIIIS APTAKELVKK LEEYVPEYEV GLVWDDQNQM PSNSLVPEPL ETPAITSS

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.