Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G033800.1 | Wheat | cytosol | 97.35 | 97.78 |
| TraesCS4A01G277200.1 | Wheat | cytosol | 93.36 | 95.05 |
| EER93620 | Sorghum | cytosol | 80.09 | 78.02 |
| Zm00001d033605_P001 | Maize | cytosol | 80.97 | 76.89 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 60.62 | 69.54 |
| GSMUA_Achr3P29740_001 | Banana | cytosol, plastid | 57.52 | 65.66 |
| GSMUA_Achr8P31460_001 | Banana | cytosol | 60.18 | 64.45 |
| KRH32950 | Soybean | cytosol | 56.64 | 62.44 |
| VIT_13s0064g00740.t01 | Wine grape | cytosol | 58.85 | 61.86 |
| HORVU4Hr1G005660.7 | Barley | nucleus | 60.18 | 61.54 |
| TraesCS1B01G173200.1 | Wheat | mitochondrion | 55.75 | 60.58 |
| KRH39935 | Soybean | cytosol | 59.29 | 60.09 |
| TraesCS1B01G379700.1 | Wheat | cytosol | 56.19 | 59.07 |
| TraesCS4B01G313800.1 | Wheat | mitochondrion | 52.65 | 58.05 |
| TraesCS4B01G250400.1 | Wheat | mitochondrion | 52.65 | 58.05 |
| VIT_08s0007g08340.t01 | Wine grape | cytosol | 56.19 | 57.21 |
| GSMUA_Achr4P03590_001 | Banana | plastid | 60.62 | 55.47 |
| TraesCS3B01G281000.1 | Wheat | cytosol | 53.98 | 53.98 |
| TraesCS3B01G241600.1 | Wheat | cytosol | 51.77 | 48.95 |
| TraesCS5B01G561400.1 | Wheat | plastid | 52.65 | 48.18 |
| TraesCS5B01G348600.1 | Wheat | cytosol | 51.33 | 48.13 |
| TraesCS5B01G348300.1 | Wheat | cytosol | 53.1 | 48.0 |
| TraesCS5B01G561300.1 | Wheat | plastid | 53.1 | 48.0 |
| TraesCS5B01G348400.1 | Wheat | cytosol | 52.21 | 47.97 |
| TraesCS2B01G397600.2 | Wheat | cytosol | 54.87 | 44.29 |
| TraesCS1B01G471300.1 | Wheat | cytosol, plastid | 51.77 | 43.66 |
Protein Annotations
| EnsemblPlants:TraesCS4B01G035700.1 | EnsemblPlantsGene:TraesCS4B01G035700 | Gene3D:3.40.50.450 | InterPro:LOG | InterPro:LOG_fam | PANTHER:PTHR31223 |
| PANTHER:PTHR31223:SF25 | PFAM:PF03641 | SEG:seg | SUPFAM:SSF102405 | TIGRFAMs:TIGR00730 | MapMan:11.4.1.2 |
Description
No Description!
Coordinates
chr4B:-:25945103..25946603
Molecular Weight (calculated)
23574.0 Da
IEP (calculated)
4.962
GRAVY (calculated)
-0.125
Length
226 amino acids
Sequence
(BLAST)
(BLAST)
001: MEANQEKAPE TASGGDAPRP VRAVCVFCGS RPGNQPSFSA AALDLGKQLV ERQLDLVYGG GSGGLMGLVS KAVHDGGRHV LGVIPSALLP EEVSGETLGE
101: VKVVRDMHER KSEMAKHSDA FIALPGGYGT IEELLEIITW AQLGIHNKPV GLLNVDGYYN SLLSLFDKGV EEGFIDDAAR NIFVLADNAA DLLTKLTAAA
201: VAAHADDGGG EDRNGTAAAG AKRKRG
101: VKVVRDMHER KSEMAKHSDA FIALPGGYGT IEELLEIITW AQLGIHNKPV GLLNVDGYYN SLLSLFDKGV EEGFIDDAAR NIFVLADNAA DLLTKLTAAA
201: VAAHADDGGG EDRNGTAAAG AKRKRG
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.