Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G033800.1 | Wheat | cytosol | 61.99 | 60.89 |
| TraesCS4A01G277200.1 | Wheat | cytosol | 61.09 | 60.81 |
| TraesCS4B01G035700.1 | Wheat | cytosol | 61.54 | 60.18 |
| EER93620 | Sorghum | cytosol | 57.47 | 54.74 |
| Zm00001d033605_P001 | Maize | cytosol | 57.01 | 52.94 |
| GSMUA_AchrUn_... | Banana | cytosol, mitochondrion, nucleus | 44.34 | 49.75 |
| VIT_13s0064g00740.t01 | Wine grape | cytosol | 46.15 | 47.44 |
| GSMUA_Achr8P31460_001 | Banana | cytosol | 44.34 | 46.45 |
| KRH32950 | Soybean | cytosol | 42.99 | 46.34 |
| GSMUA_Achr3P29740_001 | Banana | cytosol, plastid | 41.18 | 45.96 |
| KRH39935 | Soybean | cytosol | 44.34 | 43.95 |
| VIT_08s0007g08340.t01 | Wine grape | cytosol | 42.99 | 42.79 |
| GSMUA_Achr4P03590_001 | Banana | plastid | 43.44 | 38.87 |
| HORVU5Hr1G124750.1 | Barley | cytosol | 41.18 | 36.69 |
| HORVU2Hr1G089620.5 | Barley | cytosol | 43.44 | 36.5 |
| HORVU1Hr1G079570.13 | Barley | plastid | 46.61 | 36.27 |
| HORVU3Hr1G066810.9 | Barley | mitochondrion | 41.63 | 32.97 |
| HORVU1Hr1G094290.7 | Barley | plastid | 38.46 | 29.62 |
| HORVU3Hr1G050770.10 | Barley | mitochondrion | 37.56 | 23.78 |
| HORVU4Hr1G079860.4 | Barley | cytosol, nucleus | 32.13 | 23.51 |
Protein Annotations
| EnsemblPlants:HORVU4Hr1G005660.7 | EnsemblPlantsGene:HORVU4Hr1G005660 | Gene3D:3.40.50.450 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009691 | GO:GO:0009987 | GO:GO:0016787 | InterPro:LOG |
| InterPro:LOG_fam | PANTHER:PTHR31223 | PANTHER:PTHR31223:SF25 | PFAM:PF03641 | SEG:seg | SUPFAM:SSF102405 |
| TIGRFAMs:TIGR00730 | UniParc:UPI000B482F65 | UniProt:A0A287N148 | MapMan:11.4.1.2 | : | : |
Description
Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A287N148]
Coordinates
chrchr4H:+:13249442..13251157
Molecular Weight (calculated)
24299.1 Da
IEP (calculated)
11.238
GRAVY (calculated)
-0.714
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: GGEPGEGHRR RRRPEAGASG VRLLRQQGWQ PAVLQRRRPR PREAAGGEAA RPRLRRRQRR PDGPRVQGRP RRRPPRPRVK VIPSALLPEE VSGETLGEVK
101: VVRDMHERKS EMAKHSDAFI ALPGGYGTIE ELLEIITWAQ LGIHNKPVGL LNVDGYYNSL LSLFDKGVEE GFIDDASRNI FVLADNAADL LTKLTAAAET
201: AHLGGDDPNG TAAAGVKRKR G
101: VVRDMHERKS EMAKHSDAFI ALPGGYGTIE ELLEIITWAQ LGIHNKPVGL LNVDGYYNSL LSLFDKGVEE GFIDDASRNI FVLADNAADL LTKLTAAAET
201: AHLGGDDPNG TAAAGVKRKR G
001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR
Arabidopsis Description
LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.