Factsheet for VIT_08s0007g08340.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_13s0064g00740.t01	Wine grape	cytosol	69.37	71.63
KRH32950	Soybean	cytosol	63.51	68.78
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	59.91	67.51
KRH39935	Soybean	cytosol	67.12	66.82
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	58.56	65.66
VIT_06s0004g02680.t01	Wine grape	cytosol, mitochondrion, nucleus	62.61	65.57
VIT_04s0008g01040.t01	Wine grape	cytosol	62.61	64.06
GSMUA_Achr8P31460_001	Banana	cytosol	60.81	63.98
VIT_06s0004g00590.t01	Wine grape	cytosol, mitochondrion	58.56	63.41
VIT_08s0007g02480.t01	Wine grape	cytosol	61.26	62.96
VIT_08s0040g01780.t01	Wine grape	cytosol	61.71	62.84
VIT_18s0001g14030.t01	Wine grape	mitochondrion	59.91	61.57
VIT_18s0001g00210.t01	Wine grape	cytosol	56.31	57.08
TraesCS4A01G277200.1	Wheat	cytosol	56.31	56.31
GSMUA_Achr4P03590_001	Banana	plastid	62.61	56.28
TraesCS4B01G035700.1	Wheat	cytosol	57.21	56.19
TraesCS4D01G033800.1	Wheat	cytosol	56.76	56.0
VIT_03s0038g03420.t01	Wine grape	cytosol	56.31	54.59
EER93620	Sorghum	cytosol	56.31	53.88
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	18.92	52.5
Zm00001d033605_P001	Maize	cytosol	53.6	50.0
HORVU4Hr1G005660.7	Barley	nucleus	42.79	42.99

Protein Annotations

EntrezGene:100260544	wikigene:100260544	MapMan:11.4.1.2	Gene3D:3.40.50.450	ProteinID:CBI29858	ProteinID:CBI29858.3
UniProt:D7THY2	EMBL:FN595991	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691
GO:GO:0009987	GO:GO:0016787	EntrezGene:LOC100260544	wikigene:LOC100260544	InterPro:LOG	InterPro:LOG_fam
PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF8	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI00015CACD2
ArrayExpress:VIT_08s0007g08340	EnsemblPlantsGene:VIT_08s0007g08340	EnsemblPlants:VIT_08s0007g08340.t01	RefSeq:XP_002277852	RefSeq:XP_002277852.1	RefSeq:XP_019076997.1

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:D7THY2]

Coordinates

chr8:+:21677949..21679263

Molecular Weight (calculated)

24419.5 Da

IEP (calculated)

6.369

GRAVY (calculated)

-0.177

Length

222 amino acids

Sequence
(BLAST)

001: MEGKVERASS EKRWTFKRIC VFCGSKPGSK SIFSDATVAL GKQLVERNID LVYGGGSKGL MGLISKTVLD GGRHVLGIIP KALMPYEITG KTIGDIKIVS
101: SMHERKSEMA KRADAFIALP GGYGTMEELL EMVTWSQLGI HGKPVGLLNV DGYFNSLIEL FDKGVEEGFI VDSERHIIVS ADTAEELMKK MEEYAPVHDA
201: VTSRRSWEEE QSSGIITYGR AQ

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.