Factsheet for GSMUA_Achr3P29740_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol, plastid

Predictor Summary:

plastid 5
endoplasmic reticulum 1
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	75.76	76.14
GSMUA_Achr8P31460_001	Banana	cytosol	75.76	71.09
VIT_13s0064g00740.t01	Wine grape	cytosol	70.71	65.12
GSMUA_Achr4P03590_001	Banana	plastid	80.81	64.78
KRH32950	Soybean	cytosol	65.66	63.41
GSMUA_Achr3P25920_001	Banana	cytosol	65.15	60.28
KRH39935	Soybean	cytosol	67.17	59.64
TraesCS4A01G277200.1	Wheat	cytosol	66.16	59.01
EER93620	Sorghum	cytosol	68.69	58.62
VIT_08s0007g08340.t01	Wine grape	cytosol	65.66	58.56
TraesCS4D01G033800.1	Wheat	cytosol	65.66	57.78
TraesCS4B01G035700.1	Wheat	cytosol	65.66	57.52
Zm00001d033605_P001	Maize	cytosol	66.67	55.46
GSMUA_AchrUn_...	Banana	cytosol	56.06	54.95
GSMUA_Achr11P...	Banana	cytosol, plastid	60.61	54.79
GSMUA_Achr1P09040_001	Banana	cytosol	60.1	54.59
GSMUA_Achr6P36490_001	Banana	cytosol	58.59	53.46
GSMUA_Achr7P04070_001	Banana	cytosol	57.58	53.02
GSMUA_Achr8P19190_001	Banana	cytosol	59.6	52.68
GSMUA_Achr8P04060_001	Banana	cytosol	59.6	52.21
GSMUA_Achr2P03620_001	Banana	cytosol	57.07	51.6
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	57.07	51.6
GSMUA_Achr2P08480_001	Banana	mitochondrion	65.66	51.38
GSMUA_Achr2P08380_001	Banana	cytosol	58.08	50.22
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	38.89	49.68
GSMUA_Achr6P35930_001	Banana	cytosol	52.53	46.64
GSMUA_Achr2P00980_001	Banana	cytosol	58.08	46.56
GSMUA_AchrUn_...	Banana	cytosol	56.57	45.34
HORVU4Hr1G005660.7	Barley	nucleus	45.96	41.18

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:GSMUA_Achr3G29740_001	EnsemblPlants:GSMUA_Achr3P29740_001
EnsemblPlants:GSMUA_Achr3T29740_001	InterPro:LOG	InterPro:LOG_fam	UniProt:M0SIZ0	PFAM:PF03641	PANTHER:PTHR31223
PANTHER:PTHR31223:SF8	SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002964FDC	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Source:GMGC_GENE;Acc:GSMUA_Achr3G29740_001]

Coordinates

chr3:-:28757885..28758897

Molecular Weight (calculated)

21393.7 Da

IEP (calculated)

6.599

GRAVY (calculated)

-0.069

Length

198 amino acids

Sequence
(BLAST)

001: METGQGNEVG SGSGSKARFR SICVFCGSRS GNRPSFSEAA LDLGKQLVER NINLVYGGGS VGLMGLISKT VYDGGCHVLG QITHRPRFLV QISGETIGDV
101: IKVADMHDRK SEMAKHADAF IALPGGYGTM EELLEMIAYS QLGIHHKPVG LLNVDGYYDS LLHLFDTGVH QGFIEDSARH IVVSAETAAE LLRKMEVR

Best Arabidopsis Sequence Match ( AT2G28305.3 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEVAFSLFS LLV

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.