Factsheet for GSMUA_Achr7P04070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_AchrUn_...	Banana	cytosol	84.19	89.6
GSMUA_Achr2P03620_001	Banana	cytosol	84.19	82.65
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	84.19	82.65
VIT_18s0001g00210.t01	Wine grape	cytosol	76.28	74.89
VIT_03s0038g03420.t01	Wine grape	cytosol	79.07	74.24
GSMUA_AchrUn_...	Banana	cytosol	83.26	72.47
Zm00001d021450_P001	Maize	cytosol	76.74	71.12
EER97131	Sorghum	cytosol	76.74	70.21
GSMUA_Achr1P09040_001	Banana	cytosol	69.3	68.35
OQU88832	Sorghum	cytosol, plastid	72.09	67.98
CDX69118	Canola	cytosol	70.23	67.41
GSMUA_Achr6P36490_001	Banana	cytosol	67.91	67.28
GSMUA_Achr11P...	Banana	cytosol, plastid	67.91	66.67
AT4G35190.1	Thale cress	cytosol	70.7	66.67
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	24.65	66.25
CDX76318	Canola	cytosol	69.77	65.79
Bra011592.1-P	Field mustard	cytosol	71.16	65.38
Bra020803.1-P	Field mustard	cytosol	69.3	65.35
Os09t0547500-01	Rice	cytosol, plastid	68.84	65.2
CDY52642	Canola	cytosol	70.7	64.96
GSMUA_Achr8P19190_001	Banana	cytosol	66.98	64.29
TraesCS5A01G347400.1	Wheat	cytosol	73.02	63.82
TraesCS5B01G348400.1	Wheat	cytosol	72.56	63.41
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	45.12	62.58
TraesCS5B01G348300.1	Wheat	cytosol	72.56	62.4
TraesCS5B01G348600.1	Wheat	cytosol	69.77	62.24
TraesCS5A01G347500.1	Wheat	cytosol	70.7	62.04
TraesCS5D01G353600.1	Wheat	cytosol	71.63	61.85
GSMUA_Achr8P04060_001	Banana	cytosol	63.26	60.18
GSMUA_Achr2P08380_001	Banana	cytosol	63.26	59.39
CDY17522	Canola	cytosol	62.79	58.95
GSMUA_Achr2P00980_001	Banana	cytosol	67.44	58.7
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	53.49	58.38
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	53.02	57.58
GSMUA_Achr3P25920_001	Banana	cytosol	54.88	55.14
GSMUA_Achr8P31460_001	Banana	cytosol	53.49	54.5
GSMUA_Achr6P35930_001	Banana	cytosol	55.81	53.81
GSMUA_Achr4P03590_001	Banana	plastid	55.81	48.58
GSMUA_Achr2P08480_001	Banana	mitochondrion	55.81	47.43
KRH32487	Soybean	cytosol	4.19	47.37

Protein Annotations

EnsemblPlants:GSMUA_Achr7P04070_001	EnsemblPlants:GSMUA_Achr7T04070_001	EnsemblPlantsGene:GSMUA_Achr7G04070_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI0002961F26	UniProt:M0TEJ7	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Source:GMGC_GENE;Acc:GSMUA_Achr7G04070_001]

Coordinates

chr7:-:3172622..3173802

Molecular Weight (calculated)

23547.5 Da

IEP (calculated)

6.518

GRAVY (calculated)

-0.120

Length

215 amino acids

Sequence
(BLAST)

001: MEENKVGRPS RFRKVCVFCG SSPGKRNCYQ DAAVELGKEL VARKVGLVYG GGSVGLMGLV SEAVHRGGGH VIGIIPRTLM CKEITGETIG EVRPVASMHQ
101: RKAEMARYSD AFIALPGGYG TLEELLEVIT WAQLGIHSKP VGLLNVDGYY DSLLAFIDKA VDDGFIQPIQ RRLVVSASNA GDLVQKLEEY EPVQDDVVAR
201: LRWEMEQVAS RERSP

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.