Factsheet for GSMUA_Achr2P03620_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
endoplasmic reticulum 1
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	93.61	93.61
GSMUA_Achr7P04070_001	Banana	cytosol	82.65	84.19
GSMUA_AchrUn_...	Banana	cytosol	94.52	83.81
GSMUA_AchrUn_...	Banana	cytosol	77.17	83.66
VIT_03s0038g03420.t01	Wine grape	cytosol	83.11	79.48
VIT_18s0001g00210.t01	Wine grape	cytosol	79.45	79.45
VIT_14s0036g00590.t01	Wine grape	cytosol, extracellular	26.94	73.75
Zm00001d021450_P001	Maize	cytosol	77.63	73.28
EER97131	Sorghum	cytosol	78.54	73.19
GSMUA_Achr1P09040_001	Banana	cytosol	72.6	72.94
GSMUA_Achr6P36490_001	Banana	cytosol	72.15	72.81
AT4G35190.1	Thale cress	cytosol	75.34	72.37
OQU88832	Sorghum	cytosol, plastid	73.97	71.05
CDX76318	Canola	cytosol	73.52	70.61
CDX69118	Canola	cytosol	72.15	70.54
Bra011592.1-P	Field mustard	cytosol	75.34	70.51
Bra020803.1-P	Field mustard	cytosol	73.06	70.18
CDY52642	Canola	cytosol	74.89	70.09
TraesCS5B01G348400.1	Wheat	cytosol	77.17	68.7
TraesCS5A01G347400.1	Wheat	cytosol	77.17	68.7
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	47.49	67.1
TraesCS5D01G353600.1	Wheat	cytosol	76.26	67.07
TraesCS5B01G348300.1	Wheat	cytosol	76.26	66.8
GSMUA_Achr11P...	Banana	cytosol, plastid	66.67	66.67
Os09t0547500-01	Rice	cytosol, plastid	68.49	66.08
TraesCS5A01G347500.1	Wheat	cytosol	72.6	64.9
GSMUA_Achr8P19190_001	Banana	cytosol	66.21	64.73
TraesCS5B01G348600.1	Wheat	cytosol	71.23	64.73
CDY17522	Canola	cytosol	66.67	63.76
GSMUA_Achr2P08380_001	Banana	cytosol	65.3	62.45
GSMUA_Achr8P04060_001	Banana	cytosol	63.93	61.95
GSMUA_Achr2P00980_001	Banana	cytosol	69.41	61.54
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	53.88	59.9
KRH32487	Soybean	cytosol	5.02	57.89
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	51.6	57.07
GSMUA_Achr3P25920_001	Banana	cytosol	55.71	57.01
GSMUA_Achr8P31460_001	Banana	cytosol	53.42	55.45
GSMUA_Achr6P35930_001	Banana	cytosol	55.25	54.26
GSMUA_Achr2P08480_001	Banana	mitochondrion	58.45	50.59
GSMUA_Achr4P03590_001	Banana	plastid	55.25	48.99

Protein Annotations

EnsemblPlants:GSMUA_Achr2P03620_001	EnsemblPlants:GSMUA_Achr2T03620_001	EnsemblPlantsGene:GSMUA_Achr2G03620_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF14	PFAM:PF03641	SEG:seg
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000296F39C	UniProt:M0S4V3	MapMan:11.4.1.2	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG5 [Source:GMGC_GENE;Acc:GSMUA_Achr2G03620_001]

Coordinates

chr2:+:9279272..9280648

Molecular Weight (calculated)

23893.9 Da

IEP (calculated)

5.953

GRAVY (calculated)

0.002

Length

219 amino acids

Sequence
(BLAST)

001: MEEITVGKSR FKRVCVFCGS STGKRNCYQD AAVELGKELV ARKVDLVYGG GSVGLMGLVS EAVHTGGGHV IGIIPRTLMS KEITGETFGE VKPVASMHQR
101: KAEMARHSDA FIALPGGYGT LEELLEVITW AQLGIHNKPV GLLNVDGYYN SLLAFIDKAV EDGFIQPYQR HIFVSAPNAK DLVQKLEEYV PVEDALIAKL
201: SWEMEQVGLN STLQAEIAR

Best Arabidopsis Sequence Match ( AT4G35190.1 )
(BLAST)

001: MEIVKSRFKR VCVFCGSSSG KRECYSDAAT DLAQELVTRR LNLVYGGGSI GLMGLVSQAV HEAGGHVLGI IPRTLMDKEI TGETYGEVIA VADMHERKAE
101: MARHSDCFIA LPGGYGTLEE LLEVIAWAQL GIHDKPVGLL NVDGYYNYLL TFIDKAVDDG FIKPSQRHIF VSAPNAKELV QKLEAYKPVN DGVIAKSRWE
201: VEKKVQQPQQ QQQVVFCSNT SMQTEIAL

Arabidopsis Description

LOG5Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178UWQ5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.