Factsheet for GSMUA_Achr2P00980_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	cytosol, plastid	76.92	86.76
GSMUA_Achr8P19190_001	Banana	cytosol	77.33	85.27
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	53.04	84.52
VIT_18s0001g14030.t01	Wine grape	mitochondrion	72.87	83.33
Solyc04g081290.2.1	Tomato	cytosol	72.47	79.56
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	72.47	79.56
KRH05931	Soybean	cytosol	69.23	79.53
KRH51716	Soybean	cytosol	70.45	78.73
KRH17410	Soybean	cytosol	66.8	77.46
GSMUA_Achr6P36490_001	Banana	cytosol	67.21	76.5
KRH61054	Soybean	cytosol	69.64	76.44
GSMUA_Achr1P09040_001	Banana	cytosol	65.18	73.85
GSMUA_AchrUn_...	Banana	cytosol	57.89	70.79
GSMUA_Achr1P07310_001	Banana	cytosol, mitochondrion	61.54	69.41
GSMUA_Achr2P03620_001	Banana	cytosol	61.54	69.41
GSMUA_Achr8P04060_001	Banana	cytosol	62.35	68.14
GSMUA_Achr7P04070_001	Banana	cytosol	58.7	67.44
AT2G35990.1	Thale cress	cytosol	57.89	67.14
GSMUA_Achr2P08380_001	Banana	cytosol	61.94	66.81
Bra017270.1-P	Field mustard	cytosol	57.49	66.67
CDY40411	Canola	cytosol	57.49	66.67
CDY32063	Canola	cytosol	56.68	65.73
CDX79649	Canola	cytosol	48.99	65.41
Os03t0857900-02	Rice	nucleus	63.56	63.82
GSMUA_Achr3P25920_001	Banana	cytosol	55.06	63.55
TraesCS4A01G317900.1	Wheat	plastid	62.75	63.27
TraesCS4A01G318100.1	Wheat	plastid	63.16	62.9
HORVU5Hr1G124750.1	Barley	cytosol	63.16	62.9
TraesCS5B01G561400.1	Wheat	plastid	62.75	62.75
TraesCS5D01G568500.1	Wheat	cytosol	62.75	62.5
TraesCS5D01G568400.1	Wheat	plastid	59.11	62.13
TraesCS5B01G561300.1	Wheat	plastid	62.75	62.0
GSMUA_AchrUn_...	Banana	cytosol	61.54	61.54
GSMUA_AchrUn_...	Banana	cytosol, mitochondrion, nucleus	47.37	59.39
GSMUA_Achr6P35930_001	Banana	cytosol	53.44	59.19
GSMUA_Achr3P29740_001	Banana	cytosol, plastid	46.56	58.08
GSMUA_Achr2P08480_001	Banana	mitochondrion	55.47	54.15
GSMUA_Achr8P31460_001	Banana	cytosol	46.15	54.03
EER93059	Sorghum	cytosol	38.06	51.65
GSMUA_Achr4P03590_001	Banana	plastid	50.61	50.61

Protein Annotations

EnsemblPlants:GSMUA_Achr2P00980_001	EnsemblPlants:GSMUA_Achr2T00980_001	EnsemblPlantsGene:GSMUA_Achr2G00980_001	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787
InterPro:LOG	InterPro:LOG_fam	PANTHER:PTHR31223	PANTHER:PTHR31223:SF19	PFAM:PF03641	SUPFAM:SSF102405
TIGRFAMs:TIGR00730	UniParc:UPI0002962469	UniProt:M0S439	MapMan:11.4.1.2	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Source:GMGC_GENE;Acc:GSMUA_Achr2G00980_001]

Coordinates

chr2:+:5642192..5643526

Molecular Weight (calculated)

26810.4 Da

IEP (calculated)

7.302

GRAVY (calculated)

-0.119

Length

247 amino acids

Sequence
(BLAST)

001: MEAEAQDVMA KRPSTSRFGR VCVFCGSSPG KKASYQLAAT QLGHELVQRN IDLVYGGGSI GLMGLVSRAV HDGGRHVLGV IPRTLMPREF GDLQITGETV
101: GELRPVSGMH QRKAEMARQA DAFIALPGGY GTLEELLEAI TWAQLGIHDK PVGLLNVDGY YNSLLSFIDK AVDEGFIAPA ARHIIISSQT AHELLSKLEK
201: VICMIQAGSR KAFGFKQEYV PTHDGGAPKL SWEMEQLGHS PKLDISR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.