Factsheet for HORVU5Hr1G124750.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 5
nucleus 1
cytosol 3

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G568500.1	Wheat	cytosol	97.18	97.18
TraesCS5B01G561300.1	Wheat	plastid	97.18	96.4
TraesCS4A01G318100.1	Wheat	plastid	95.97	95.97
VIT_18s0001g14030.t01	Wine grape	mitochondrion	63.31	72.69
GSMUA_Achr8P19190_001	Banana	cytosol	63.71	70.54
Os03t0857900-02	Rice	nucleus	69.76	70.33
GSMUA_Achr11P...	Banana	cytosol, plastid	61.29	69.41
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, plastid	43.15	69.03
Solyc04g081290.2.1	Tomato	cytosol	62.1	68.44
PGSC0003DMT400009551	Potato	cytosol, mitochondrion, plastid	62.1	68.44
KRH51716	Soybean	cytosol	60.89	68.33
KRH05931	Soybean	cytosol	58.06	66.98
KRH61054	Soybean	cytosol	60.08	66.22
CDY40411	Canola	cytosol	56.85	66.2
Bra017270.1-P	Field mustard	cytosol	56.45	65.73
KRH17410	Soybean	cytosol	56.05	65.26
CDY32063	Canola	cytosol	56.05	65.26
AT2G35990.1	Thale cress	cytosol	56.05	65.26
GSMUA_Achr2P00980_001	Banana	cytosol	62.9	63.16
CDX79649	Canola	cytosol	46.77	62.7
EER93059	Sorghum	cytosol	40.73	55.49
HORVU2Hr1G089620.5	Barley	cytosol	58.47	55.13
HORVU1Hr1G094290.7	Barley	plastid	56.85	49.13
HORVU4Hr1G005660.7	Barley	nucleus	36.69	41.18
HORVU1Hr1G079570.13	Barley	plastid	46.37	40.49
HORVU3Hr1G050770.10	Barley	mitochondrion	55.65	39.54
HORVU3Hr1G066810.9	Barley	mitochondrion	43.55	38.71
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	33.87	27.81

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005634	GO:GO:0005737	GO:GO:0005829	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009691	GO:GO:0009987	GO:GO:0016787	EnsemblPlantsGene:HORVU5Hr1G124750	EnsemblPlants:HORVU5Hr1G124750.1
InterPro:LOG	InterPro:LOG_fam	UniProt:M0X4S5	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF27
SUPFAM:SSF102405	TIGRFAMs:TIGR00730	UniParc:UPI000295A68E	SEG:seg	:	:

Description

Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:M0X4S5]

Coordinates

chrchr5H:-:667303153..667304622

Molecular Weight (calculated)

26169.4 Da

IEP (calculated)

6.246

GRAVY (calculated)

-0.075

Length

248 amino acids

Sequence
(BLAST)

001: MEQQEEAPTS TTTVALATSP KPAPASNGCK KLPSRFRRVC VFCGSSPGRK PAYQLAAVQL GQQLVERGID LVYGGGSVGL MGLVSRAVHG GGGRVTGVVP
101: RSVLPRELIG ETPGGEEVKA VSGMHQRKAE MARRADAFVA LPGGYGTLEE LLEVITWAQL GIHDKPVGLL NVEGYYDSLL DFIDRAVDEG FVSPAARHII
201: VAAPTPGELL AALEEYAPAH HDASAVKLSW ESSVDTMACS PTKPDISR

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.