Factsheet for HORVU3Hr1G050770.10

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
TargetP:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G211100.1	Wheat	cytosol	65.62	97.86
TraesCS3B01G241600.1	Wheat	cytosol	66.48	97.07
TraesCS3D01G213900.1	Wheat	cytosol	66.76	96.68
Os01t0588900-01	Rice	cytosol	57.59	83.06
EES03190	Sorghum	cytosol	56.73	78.88
Zm00001d011246_P002	Maize	cytosol	53.87	73.73
VIT_08s0007g02480.t01	Wine grape	cytosol	44.41	71.76
KRH32819	Soybean	cytosol	43.84	71.5
Solyc01g007270.1.1	Tomato	cytosol	14.33	71.43
KRH72214	Soybean	cytosol	43.55	71.03
GSMUA_Achr8P04060_001	Banana	cytosol	45.56	70.35
KRG96247	Soybean	cytosol	42.41	69.48
KRH67989	Soybean	cytosol	42.41	69.48
GSMUA_Achr2P08380_001	Banana	cytosol	45.56	69.43
CDY04985	Canola	cytosol	41.83	67.91
AT5G06300.1	Thale cress	cytosol	41.55	66.82
Solyc10g082020.1.1	Tomato	cytosol	41.55	66.82
HORVU1Hr1G094290.7	Barley	plastid	53.87	65.51
PGSC0003DMT400042349	Potato	cytosol	40.69	65.14
PGSC0003DMT400072345	Potato	cytosol	41.26	63.16
GSMUA_Achr6P35930_001	Banana	cytosol	39.54	61.88
HORVU2Hr1G089620.5	Barley	cytosol	42.69	56.65
HORVU5Hr1G124750.1	Barley	cytosol	39.54	55.65
HORVU3Hr1G066810.9	Barley	mitochondrion	33.24	41.58
HORVU1Hr1G079570.13	Barley	plastid	31.23	38.38
HORVU4Hr1G005660.7	Barley	nucleus	23.78	37.56
Bra028735.1-P	Field mustard	cytosol	11.46	31.75
HORVU4Hr1G079860.4	Barley	cytosol, nucleus	22.35	25.83

Protein Annotations

MapMan:11.4.1.2	Gene3D:3.40.50.450	UniProt:A0A287L0T8	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058
GO:GO:0009691	GO:GO:0009987	GO:GO:0048509	EnsemblPlantsGene:HORVU3Hr1G050770	EnsemblPlants:HORVU3Hr1G050770.10	InterPro:LOG
InterPro:LOG_fam	PFAM:PF03641	PANTHER:PTHR31223	PANTHER:PTHR31223:SF13	SUPFAM:SSF102405	TIGRFAMs:TIGR00730
UniParc:UPI000B470722	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:-:364478357..364482751

Molecular Weight (calculated)

38356.0 Da

IEP (calculated)

8.030

GRAVY (calculated)

-0.396

Length

349 amino acids

Sequence
(BLAST)

001: PNKYEWNAKL RNLLFSSRRN QRNRERKVVY SQVSCGEDIA QQCWTHQPTN EHPSMPKQKH PLSINGRLPP RHPAQLKSQP RLPLPLPYQQ QYLPGAKNHQ
101: PSLAPTPTEA MAVEATTEKN TGTGAAGGVA PESGDRRSRF RRICVYCGSA KGRKASYQDA AVELGKELVE RGIDLVYGGG SIGLMGLVSH AVHDGGRHVI
201: GVIPKSLMPR EVTGEPVGEV RAVSGMHERK AEMVRSADAF IALPGGYGTL DELLEVLTWA QLGIHKKPIG LLNVDGFYNF FLSFIDMAVS EGFIKEDARH
301: LVISAPTAKE LVLKLEEYVP DYEIGLVWED QGQIGHGFVP ELEPGIASS

Best Arabidopsis Sequence Match ( AT2G28305.1 )
(BLAST)

001: MEIESKFKRI CVFCGSSAGN KVSYKDAAIE LGTELVSRNI DLVYGGGSIG LMGLISQAVF NGGRHVIGVI PKTLMPREIT GETVGEVKAV ADMHQRKAEM
101: AKHSDAFIAL PGGYGTLEEL LEVITWAQLG IHDKPVGLLN VEGYYNSLLS FIDKAVEEGF ISPTARHIIV SAPSAKELVK KLEDYVPRHE KVASKKSWEM
201: EQIGLSPTCE ISR

Arabidopsis Description

LOG1Cytokinin riboside 5'-monophosphate phosphoribohydrolase [Source:UniProtKB/TrEMBL;Acc:A0A178VS96]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.